EnhancerDB
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  3. vista53062[chr6:109268721-109269067]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53062[chr6:109268721-109269067]
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Tissue distribution of vista53062
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Transcription factor that possibly regulate vista53062[chr6:109268721-109269067]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 109268767 109269027 STAT3 UCSC Txn Factor no Conserved 108541246
chr6 109268748 109268767 REST JASPAR yes 70414797
chr6 109268748 109268767 REST JASPAR yes 104217442
chr6 109268799 109268804 SP1 TRANSFAC yes 70414798
chr6 109268799 109268804 SP1 TRANSFAC yes 104217443
chr6 109268812 109268822 CEBPG JASPAR yes 70414799
chr6 109268812 109268822 CEBPG JASPAR yes 104217444
chr6 109268814 109268820 JUN TRANSFAC yes 70414800
chr6 109268814 109268820 JUN TRANSFAC yes 104217445
chr6 109268818 109268821 MYB TRANSFAC yes 70414801
chr6 109268818 109268821 MYB TRANSFAC yes 104217446
chr6 109268819 109268834 FOXA1 JASPAR yes 70414802
chr6 109268819 109268834 FOXA1 JASPAR yes 104217447
chr6 109268821 109268833 FOXC2 JASPAR yes 70414803
chr6 109268821 109268833 FOXC2 JASPAR yes 104217448
chr6 109268823 109268834 FOXA1 JASPAR yes 70414804
chr6 109268823 109268834 FOXA1 JASPAR yes 104217449
chr6 109268826 109268845 PAX5 JASPAR yes 70414805
chr6 109268826 109268845 PAX5 JASPAR yes 104217450
chr6 109268829 109268846 PAX9 JASPAR yes 70414806
chr6 109268829 109268846 PAX9 JASPAR yes 104217451
chr6 109268836 109268840 LFA1 TRANSFAC yes 70414807
chr6 109268836 109268840 LFA1 TRANSFAC yes 104217452
chr6 109268841 109268844 MYB TRANSFAC yes 70414808
chr6 109268841 109268844 MYB TRANSFAC yes 104217453
chr6 109268841 109268854 ZBTB18 JASPAR yes 70414809
chr6 109268841 109268854 ZBTB18 JASPAR yes 104217454
chr6 109268857 109268868 FOXC1 JASPAR yes 70414810
chr6 109268857 109268868 FOXC1 JASPAR yes 104217455
chr6 109268864 109268879 TFAP2C JASPAR yes 70414811
chr6 109268864 109268879 TFAP2C JASPAR yes 104217456
chr6 109268865 109268870 GATA2 JASPAR yes 70414812
chr6 109268865 109268870 GATA2 JASPAR yes 104217457
chr6 109268866 109268881 TFAP2A JASPAR yes 70414813
chr6 109268866 109268881 TFAP2C JASPAR yes 70414814
chr6 109268866 109268881 TFAP2A JASPAR yes 104217458
chr6 109268866 109268881 TFAP2C JASPAR yes 104217459
chr6 109268867 109268878 TFAP2A JASPAR yes 70414815
chr6 109268867 109268878 TFAP2B JASPAR yes 70414816
chr6 109268867 109268878 TFAP2C JASPAR yes 70414817
chr6 109268867 109268878 TFAP2A JASPAR yes 104217460
chr6 109268867 109268878 TFAP2B JASPAR yes 104217461
chr6 109268867 109268878 TFAP2C JASPAR yes 104217462
chr6 109268879 109268882 MYB TRANSFAC yes 70414818
chr6 109268879 109268882 MYB TRANSFAC yes 104217463
chr6 109268896 109268904 CREB1 JASPAR yes 70414819
chr6 109268896 109268904 CREB1 JASPAR yes 104217464
chr6 109268899 109268903 ESR1 TRANSFAC yes 70414820
chr6 109268899 109268903 ESR1 TRANSFAC yes 104217465
chr6 109268910 109268917 SPIB JASPAR yes 70414821
chr6 109268910 109268917 SPIB JASPAR yes 104217466
chr6 109268921 109268926 GATA1 TRANSFAC yes 70414822
chr6 109268921 109268926 GATA1 TRANSFAC yes 104217467
chr6 109268934 109268952 NFYA JASPAR yes 70414823
chr6 109268934 109268952 NFYA JASPAR yes 104217468
chr6 109268950 109268963 SCRT2 JASPAR yes 70414824
chr6 109268950 109268963 SCRT2 JASPAR yes 104217469
chr6 109268951 109268970 RFX2 JASPAR yes 70414825
chr6 109268951 109268970 RFX2 JASPAR yes 104217470
chr6 109268953 109268968 RFX5 JASPAR yes 70414826
chr6 109268953 109268968 RFX5 JASPAR yes 104217471
chr6 109268969 109268984 MEF2C JASPAR yes 70414827
chr6 109268969 109268984 MEF2C JASPAR yes 104217472
chr6 109268988 109269002 ONECUT2 JASPAR yes 70414828
chr6 109268988 109269002 ONECUT3 JASPAR yes 70414829
chr6 109268988 109269002 ONECUT2 JASPAR yes 104217473
chr6 109268988 109269002 ONECUT3 JASPAR yes 104217474
chr6 109269000 109269012 GRHL1 JASPAR yes 70414830
chr6 109269000 109269012 GRHL1 JASPAR yes 104217475
chr6 109269001 109269011 TFCP2 JASPAR yes 70414831
chr6 109269001 109269011 TFCP2 JASPAR yes 104217476
chr6 109269018 109269036 SRF JASPAR yes 70414832
chr6 109269018 109269036 SRF JASPAR yes 104217477
chr6 109269026 109269041 FOXP1 JASPAR yes 70414833
chr6 109269026 109269041 FOXP1 JASPAR yes 104217478
chr6 109269030 109269045 FOXP1 JASPAR yes 70414834
chr6 109269030 109269045 FOXP1 JASPAR yes 104217479
chr6 109269030 109269051 IRF1 JASPAR yes 70414835
chr6 109269030 109269051 IRF1 JASPAR yes 104217480
chr6 109269031 109269046 FOXP1 JASPAR yes 70414836
chr6 109269031 109269046 FOXP1 JASPAR yes 104217481
chr6 109269054 109269065 BATF JASPAR yes 70414837
chr6 109269054 109269065 BATF JASPAR yes 104217482
SNP sites on vista53062[chr6:109268721-109269067]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 109268727 rs146247267 A G no 9250610
chr6 109268739 rs181496655 G C no 9250611
chr6 109268834 rs373352483 T C
FOXA1 PAX5 PAX9 STAT3
9250612
chr6 109269023 rs561406704 C A
SRF STAT3
9250613
chr6 109269032 rs397888152 GA G
FOXP1 IRF1 SRF
9250614
chr6 109269032 rs5879005 GA G
FOXP1 IRF1 SRF
9250615
Genes possibly regulated by vista53062[chr6:109268721-109269067]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 109169619 109295186 + ARMC2 ENSG00000118690.8 109169619 0.78 0.99 6853 898
Expression level of Genes
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miRNAs possibly regulated by vista53062[chr6:109268721-109269067]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results