EnhancerDB
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  3. rs5879005[chr6:109269032]
Enhancers that have rs5879005[chr6:109269032]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 109261225 109272035 enh23485
Astrocyte Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr6 109268721 109269067 vista53062
VISTA
Transcript factors that have rs5879005[chr6:109269032]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 109269018 109269036 SRF JASPAR yes 70414832
chr6 109269018 109269036 SRF JASPAR yes 104217477
chr6 109269026 109269041 FOXP1 JASPAR yes 70414833
chr6 109269026 109269041 FOXP1 JASPAR yes 104217478
chr6 109269030 109269045 FOXP1 JASPAR yes 70414834
chr6 109269030 109269045 FOXP1 JASPAR yes 104217479
chr6 109269030 109269051 IRF1 JASPAR yes 70414835
chr6 109269030 109269051 IRF1 JASPAR yes 104217480
chr6 109269031 109269046 FOXP1 JASPAR yes 70414836
chr6 109269031 109269046 FOXP1 JASPAR yes 104217481
Genes associated with rs5879005[chr6:109269032], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More