EnhancerDB
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  3. vista5339[chr1:226219862-226220210]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5339[chr1:226219862-226220210]
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Tissue distribution of vista5339
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Transcription factor that possibly regulate vista5339[chr1:226219862-226220210]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226219850 226219866 POU4F2 JASPAR yes 35786424
chr1 226219850 226219866 POU4F3 JASPAR yes 35786425
chr1 226219850 226219866 POU4F2 JASPAR yes 118470346
chr1 226219850 226219866 POU4F3 JASPAR yes 118470347
chr1 226219852 226219866 POU4F1 JASPAR yes 35786427
chr1 226219852 226219866 POU4F1 JASPAR yes 118470348
chr1 226219853 226219865 TEAD1 JASPAR yes 35786428
chr1 226219853 226219865 TEAD1 JASPAR yes 118470349
chr1 226219858 226219871 POU2F2 JASPAR yes 35786429
chr1 226219858 226219871 POU2F2 JASPAR yes 118470350
chr1 226219859 226219880 IRF1 JASPAR yes 35786430
chr1 226219859 226219880 IRF1 JASPAR yes 118470351
chr1 226219862 226219877 FOXP1 JASPAR yes 35786431
chr1 226219862 226219877 FOXP1 JASPAR yes 118470352
chr1 226219863 226219878 FOXP1 JASPAR yes 35786432
chr1 226219863 226219878 FOXP1 JASPAR yes 118470353
chr1 226219863 226219884 IRF1 JASPAR yes 35786433
chr1 226219863 226219884 IRF1 JASPAR yes 118470354
chr1 226219864 226219879 FOXP1 JASPAR yes 35786434
chr1 226219864 226219879 FOXP1 JASPAR yes 118470355
chr1 226219864 226219885 IRF1 JASPAR yes 35786435
chr1 226219864 226219885 IRF1 JASPAR yes 118470356
chr1 226219865 226219880 FOXP1 JASPAR yes 35786436
chr1 226219865 226219880 FOXP1 JASPAR yes 118470357
chr1 226219865 226219886 IRF1 JASPAR yes 35786437
chr1 226219865 226219886 IRF1 JASPAR yes 118470358
chr1 226219866 226219881 FOXP1 JASPAR yes 35786438
chr1 226219866 226219881 FOXP1 JASPAR yes 118470359
chr1 226219866 226219887 IRF1 JASPAR yes 35786439
chr1 226219866 226219887 IRF1 JASPAR yes 118470360
chr1 226219867 226219882 FOXP1 JASPAR yes 35786440
chr1 226219867 226219882 FOXP1 JASPAR yes 118470361
chr1 226219867 226219888 IRF1 JASPAR yes 35786441
chr1 226219867 226219888 IRF1 JASPAR yes 118470362
chr1 226219868 226219883 FOXP1 JASPAR yes 35786442
chr1 226219868 226219883 FOXP1 JASPAR yes 118470363
chr1 226219868 226219889 IRF1 JASPAR yes 35786443
chr1 226219868 226219889 IRF1 JASPAR yes 118470364
chr1 226219869 226219884 FOXP1 JASPAR yes 35786444
chr1 226219869 226219884 FOXP1 JASPAR yes 118470365
chr1 226219871 226219886 FOXP1 JASPAR yes 35786445
chr1 226219871 226219886 FOXP1 JASPAR yes 118470366
chr1 226219872 226219893 IRF1 JASPAR yes 35786446
chr1 226219872 226219893 IRF1 JASPAR yes 118470367
chr1 226219873 226219888 FOXP1 JASPAR yes 35786447
chr1 226219873 226219888 FOXP1 JASPAR yes 118470368
chr1 226219876 226219890 SPIC JASPAR yes 35786448
chr1 226219876 226219890 STAT1 JASPAR yes 35786449
chr1 226219876 226219890 SPIC JASPAR yes 118470369
chr1 226219876 226219890 STAT1 JASPAR yes 118470370
chr1 226219876 226219891 PRDM1 JASPAR yes 35786450
chr1 226219876 226219891 STAT2 JASPAR yes 35786451
chr1 226219876 226219891 PRDM1 JASPAR yes 118470371
chr1 226219876 226219891 STAT2 JASPAR yes 118470372
chr1 226219878 226219899 IRF1 JASPAR yes 35786452
chr1 226219878 226219899 IRF1 JASPAR yes 118470373
chr1 226219880 226219895 IRF9 JASPAR yes 35786453
chr1 226219880 226219895 IRF9 JASPAR yes 118470374
chr1 226219881 226219895 IRF7 JASPAR yes 35786454
chr1 226219881 226219895 IRF7 JASPAR yes 118470375
chr1 226219882 226219896 STAT1 JASPAR yes 35786455
chr1 226219882 226219896 STAT1 JASPAR yes 118470376
chr1 226219882 226219897 STAT2 JASPAR yes 35786456
chr1 226219882 226219897 STAT2 JASPAR yes 118470377
chr1 226219893 226219913 RREB1 JASPAR yes 35786457
chr1 226219893 226219913 RREB1 JASPAR yes 118470378
chr1 226219968 226219982 SPI1 JASPAR yes 35786458
chr1 226219968 226219982 SPI1 JASPAR yes 118470379
chr1 226219969 226219982 ELF1 JASPAR yes 35786459
chr1 226219969 226219982 ELF1 JASPAR yes 118470380
chr1 226219969 226219990 ZNF263 JASPAR yes 35786460
chr1 226219969 226219990 ZNF263 JASPAR yes 118470381
chr1 226219970 226219983 ELF3 JASPAR yes 35786461
chr1 226219970 226219983 ELF3 JASPAR yes 118470382
chr1 226219971 226219982 ELF5 JASPAR yes 35786462
chr1 226219971 226219982 ELF5 JASPAR yes 118470383
chr1 226219972 226219978 PEA3 TRANSFAC yes 35786463
chr1 226219972 226219978 PEA3 TRANSFAC yes 118470384
chr1 226219972 226219982 ETV6 JASPAR yes 35786464
chr1 226219972 226219982 ETV6 JASPAR yes 118470385
chr1 226219972 226219983 FLI1 JASPAR yes 35786465
chr1 226219972 226219983 FLI1 JASPAR yes 118470386
chr1 226219973 226219981 EHF JASPAR yes 35786466
chr1 226219973 226219981 EHF JASPAR yes 118470387
chr1 226219974 226219981 SPI1 JASPAR yes 35786467
chr1 226219974 226219981 SPI1 JASPAR yes 118470388
chr1 226220020 226220031 NFE2L2 JASPAR yes 35786468
chr1 226220020 226220031 NFE2L2 JASPAR yes 118470389
chr1 226220037 226220052 MEF2C JASPAR yes 35786469
chr1 226220037 226220052 MEF2C JASPAR yes 118470390
chr1 226220038 226220053 MEF2A JASPAR yes 35786470
chr1 226220038 226220053 MEF2A JASPAR yes 118470391
chr1 226220040 226220055 FOXP1 JASPAR yes 35786471
chr1 226220040 226220055 FOXP1 JASPAR yes 118470392
chr1 226220040 226220061 IRF1 JASPAR yes 35786472
chr1 226220040 226220061 IRF1 JASPAR yes 118470393
chr1 226220041 226220047 TBP TRANSFAC yes 35786473
chr1 226220041 226220047 TBP TRANSFAC yes 118470394
chr1 226220041 226220056 FOXP1 JASPAR yes 35786474
chr1 226220041 226220056 FOXP1 JASPAR yes 118470395
chr1 226220043 226220058 FOXP1 JASPAR yes 35786475
chr1 226220043 226220058 FOXP1 JASPAR yes 118470396
chr1 226220045 226220060 FOXP1 JASPAR yes 35786476
chr1 226220045 226220060 FOXP1 JASPAR yes 118470397
chr1 226220047 226220067 RREB1 JASPAR yes 35786477
chr1 226220047 226220067 RREB1 JASPAR yes 118470398
chr1 226220050 226220070 RREB1 JASPAR yes 35786478
chr1 226220050 226220070 RREB1 JASPAR yes 118470399
chr1 226220053 226220073 RREB1 JASPAR yes 35786479
chr1 226220053 226220073 RREB1 JASPAR yes 118470400
chr1 226220056 226220076 RREB1 JASPAR yes 35786480
chr1 226220056 226220076 RREB1 JASPAR yes 118470401
chr1 226220058 226220078 RREB1 JASPAR yes 35786481
chr1 226220058 226220078 RREB1 JASPAR yes 118470402
chr1 226220060 226220075 FOXP1 JASPAR yes 35786482
chr1 226220060 226220075 FOXP1 JASPAR yes 118470403
chr1 226220060 226220081 IRF1 JASPAR yes 35786483
chr1 226220060 226220081 IRF1 JASPAR yes 118470404
chr1 226220062 226220077 IRF9 JASPAR yes 35786484
chr1 226220062 226220077 IRF9 JASPAR yes 118470405
chr1 226220062 226220082 RREB1 JASPAR yes 35786485
chr1 226220062 226220082 RREB1 JASPAR yes 118470406
chr1 226220063 226220077 IRF7 JASPAR yes 35786486
chr1 226220063 226220077 IRF7 JASPAR yes 118470407
chr1 226220064 226220079 STAT2 JASPAR yes 35786487
chr1 226220064 226220079 STAT2 JASPAR yes 118470408
chr1 226220065 226220077 IRF1 JASPAR yes 35786488
chr1 226220065 226220077 IRF1 JASPAR yes 118470409
chr1 226220065 226220080 FOXP1 JASPAR yes 35786489
chr1 226220065 226220080 FOXP1 JASPAR yes 118470410
chr1 226220065 226220086 IRF1 JASPAR yes 35786490
chr1 226220065 226220086 IRF1 JASPAR yes 118470411
chr1 226220067 226220087 RREB1 JASPAR yes 35786491
chr1 226220067 226220087 RREB1 JASPAR yes 118470412
chr1 226220070 226220082 IRF1 JASPAR yes 35786492
chr1 226220070 226220082 IRF1 JASPAR yes 118470413
chr1 226220070 226220085 FOXP1 JASPAR yes 35786493
chr1 226220070 226220085 FOXP1 JASPAR yes 118470414
chr1 226220070 226220091 IRF1 JASPAR yes 35786494
chr1 226220070 226220091 IRF1 JASPAR yes 118470415
chr1 226220072 226220092 RREB1 JASPAR yes 35786495
chr1 226220072 226220092 RREB1 JASPAR yes 118470416
chr1 226220075 226220087 IRF1 JASPAR yes 35786496
chr1 226220075 226220087 IRF1 JASPAR yes 118470417
chr1 226220075 226220090 FOXP1 JASPAR yes 35786497
chr1 226220075 226220090 FOXP1 JASPAR yes 118470418
chr1 226220076 226220097 IRF1 JASPAR yes 35786498
chr1 226220076 226220097 IRF1 JASPAR yes 118470419
chr1 226220077 226220097 RREB1 JASPAR yes 35786499
chr1 226220077 226220097 RREB1 JASPAR yes 118470420
chr1 226220078 226220093 IRF9 JASPAR yes 35786500
chr1 226220078 226220093 IRF9 JASPAR yes 118470421
chr1 226220080 226220092 IRF1 JASPAR yes 35786501
chr1 226220080 226220092 IRF1 JASPAR yes 118470422
chr1 226220099 226220113 SPI1 JASPAR yes 35786502
chr1 226220099 226220113 SPIC JASPAR yes 35786503
chr1 226220099 226220113 SPI1 JASPAR yes 118470423
chr1 226220099 226220113 SPIC JASPAR yes 118470424
chr1 226220100 226220113 ELF1 JASPAR yes 35786504
chr1 226220100 226220113 ELF1 JASPAR yes 118470425
chr1 226220103 226220113 ETV6 JASPAR yes 35786505
chr1 226220103 226220113 ETV6 JASPAR yes 118470426
chr1 226220104 226220112 EHF JASPAR yes 35786506
chr1 226220104 226220112 EHF JASPAR yes 118470427
chr1 226220105 226220112 SPI1 JASPAR yes 35786507
chr1 226220105 226220112 SPI1 JASPAR yes 118470428
chr1 226220105 226220120 PRDM1 JASPAR yes 35786508
chr1 226220105 226220120 PRDM1 JASPAR yes 118470429
chr1 226220135 226220144 SRY JASPAR yes 35786509
chr1 226220135 226220144 SRY JASPAR yes 118470430
chr1 226220143 226220164 ZNF263 JASPAR yes 35786510
chr1 226220143 226220164 ZNF263 JASPAR yes 118470431
chr1 226220145 226220150 ETS2 TRANSFAC yes 35786511
chr1 226220145 226220150 ETS2 TRANSFAC yes 118470432
chr1 226220165 226220177 INSM1 JASPAR yes 35786512
chr1 226220165 226220177 INSM1 JASPAR yes 118470433
chr1 226220170 226220175 SP1 TRANSFAC yes 35786513
chr1 226220170 226220175 SP1 TRANSFAC yes 118470434
chr1 226220173 226220179 YY1 JASPAR yes 35786514
chr1 226220173 226220179 YY1 JASPAR yes 118470435
chr1 226220180 226220184 YY1 TRANSFAC yes 35786515
chr1 226220180 226220184 YY1 TRANSFAC yes 118470436
chr1 226220196 226220208 PBX1 JASPAR yes 35786516
chr1 226220196 226220208 PBX1 JASPAR yes 118470437
chr1 226220206 226220212 YY1 JASPAR yes 35786517
chr1 226220206 226220212 YY1 JASPAR yes 118470438
chr1 226220208 226220225 RARA JASPAR yes 35786518
chr1 226220208 226220225 RARA JASPAR yes 118470439
chr1 226220209 226220221 YY1 JASPAR yes 35786519
chr1 226220209 226220221 YY1 JASPAR yes 118470440
SNP sites on vista5339[chr1:226219862-226220210]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226219880 rs11385183 A AG
FOXP1 IRF1 IRF9 PRDM1 SPIC STAT1 STAT2
989397
chr1 226219941 rs555699816 G A no 989398
chr1 226220053 rs533793038 A AC
FOXP1 IRF1 MEF2A RREB1
989399
chr1 226220053 rs548461349 A C
FOXP1 IRF1 MEF2A RREB1
989400
chr1 226220066 rs373808264 A AAAAAC
FOXP1 IRF1 IRF7 IRF9 RREB1 STAT2
989401
chr1 226220066 rs561568562 A AAAAAC
FOXP1 IRF1 IRF7 IRF9 RREB1 STAT2
989402
chr1 226220171 rs546314335 G C
INSM1 SP1
989403
Genes possibly regulated by vista5339[chr1:226219862-226220210]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226124298 226129189 - LEFTY2 ENSG00000143768.7 226129189 0.96 1.0 1894 9327
chr1 226170403 226187032 - SDE2 ENSG00000143751.9 226187032 0.67 0.99 1895 67170
chr1 226249552 226259702 + H3F3A ENSG00000163041.5 226249552 0.89 0.84 1896 70658
Expression level of Genes
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miRNAs possibly regulated by vista5339[chr1:226219862-226220210]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results