EnhancerDB
  1. Home
  2. SNP
  3. rs548461349[chr1:226220053]
Enhancers that have rs548461349[chr1:226220053]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226213300 226224732 enh43161
Bone Marrow (K562) Prostate (PC-3) Large Intestine Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
chr1 226219862 226220210 vista5339
VISTA
Transcript factors that have rs548461349[chr1:226220053]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226220038 226220053 MEF2A JASPAR yes 35786470
chr1 226220038 226220053 MEF2A JASPAR yes 118470391
chr1 226220040 226220055 FOXP1 JASPAR yes 35786471
chr1 226220040 226220055 FOXP1 JASPAR yes 118470392
chr1 226220040 226220061 IRF1 JASPAR yes 35786472
chr1 226220040 226220061 IRF1 JASPAR yes 118470393
chr1 226220041 226220056 FOXP1 JASPAR yes 35786474
chr1 226220041 226220056 FOXP1 JASPAR yes 118470395
chr1 226220043 226220058 FOXP1 JASPAR yes 35786475
chr1 226220043 226220058 FOXP1 JASPAR yes 118470396
chr1 226220045 226220060 FOXP1 JASPAR yes 35786476
chr1 226220045 226220060 FOXP1 JASPAR yes 118470397
chr1 226220047 226220067 RREB1 JASPAR yes 35786477
chr1 226220047 226220067 RREB1 JASPAR yes 118470398
chr1 226220050 226220070 RREB1 JASPAR yes 35786478
chr1 226220050 226220070 RREB1 JASPAR yes 118470399
chr1 226220053 226220073 RREB1 JASPAR yes 35786479
chr1 226220053 226220073 RREB1 JASPAR yes 118470400
Genes associated with rs548461349[chr1:226220053], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More