EnhancerDB
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  3. vista5376[chr1:226872188-226872557]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5376[chr1:226872188-226872557]
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Tissue distribution of vista5376
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Transcription factor that possibly regulate vista5376[chr1:226872188-226872557]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226872177 226872198 IRF1 JASPAR yes 35832629
chr1 226872177 226872198 IRF1 JASPAR yes 118472191
chr1 226872179 226872194 PRDM1 JASPAR yes 35832630
chr1 226872179 226872194 STAT2 JASPAR yes 35832631
chr1 226872179 226872194 PRDM1 JASPAR yes 118472192
chr1 226872179 226872194 STAT2 JASPAR yes 118472193
chr1 226872182 226872197 FOXP1 JASPAR yes 35832632
chr1 226872182 226872197 FOXP1 JASPAR yes 118472194
chr1 226872183 226872198 FOXP1 JASPAR yes 35832633
chr1 226872183 226872198 FOXP1 JASPAR yes 118472195
chr1 226872193 226872203 HMBOX1 JASPAR yes 35832634
chr1 226872193 226872203 HMBOX1 JASPAR yes 118472196
chr1 226872195 226872198 MYB TRANSFAC yes 35832635
chr1 226872195 226872198 MYB TRANSFAC yes 118472197
chr1 226872201 226872206 ETS2 TRANSFAC yes 35832636
chr1 226872201 226872206 ETS2 TRANSFAC yes 118472198
chr1 226872264 226872270 MYC TRANSFAC yes 35832637
chr1 226872264 226872270 MYC TRANSFAC yes 118472199
chr1 226872294 226872298 H4TF2 TRANSFAC yes 35832638
chr1 226872294 226872298 H4TF2 TRANSFAC yes 118472200
chr1 226872327 226872344 RARA JASPAR yes 35832639
chr1 226872327 226872344 RARA JASPAR yes 118472201
chr1 226872328 226872339 STAT1 JASPAR yes 35832640
chr1 226872328 226872339 STAT1 JASPAR yes 118472202
chr1 226872337 226872345 NR4A2 JASPAR yes 35832641
chr1 226872337 226872345 NR4A2 JASPAR yes 118472203
chr1 226872339 226872343 ESR1 TRANSFAC yes 35832642
chr1 226872339 226872343 ESR1 TRANSFAC yes 118472204
chr1 226872350 226872364 POU1F1 JASPAR yes 35832643
chr1 226872350 226872364 POU1F1 JASPAR yes 118472205
chr1 226872368 226872374 TCF4 TRANSFAC yes 35832644
chr1 226872368 226872374 TCF4 TRANSFAC yes 118472206
chr1 226872402 226872407 GATA2 JASPAR yes 35832645
chr1 226872402 226872407 GATA2 JASPAR yes 118472207
chr1 226872420 226872424 YY1 TRANSFAC yes 35832646
chr1 226872420 226872424 YY1 TRANSFAC yes 118472208
chr1 226872437 226872455 RARA JASPAR yes 35832647
chr1 226872437 226872455 RARA JASPAR yes 118472209
chr1 226872457 226872468 BATF JASPAR yes 35832648
chr1 226872457 226872468 BATF JASPAR yes 118472210
chr1 226872466 226872470 TEAD2 TRANSFAC yes 35832649
chr1 226872466 226872470 TEAD2 TRANSFAC yes 118472211
chr1 226872468 226872471 MYB TRANSFAC yes 35832650
chr1 226872468 226872471 MYB TRANSFAC yes 118472212
chr1 226872479 226872482 MYB TRANSFAC yes 35832651
chr1 226872479 226872482 MYB TRANSFAC yes 118472213
chr1 226872513 226872524 EBF1 JASPAR yes 35832652
chr1 226872513 226872524 EBF1 JASPAR yes 118472214
chr1 226872525 226872534 SNAI2 JASPAR yes 35832653
chr1 226872525 226872534 SNAI2 JASPAR yes 118472215
chr1 226872525 226872535 FIGLA JASPAR yes 35832654
chr1 226872525 226872535 TCF3 JASPAR yes 35832655
chr1 226872525 226872535 TCF4 JASPAR yes 35832656
chr1 226872525 226872535 FIGLA JASPAR yes 118472216
chr1 226872525 226872535 TCF3 JASPAR yes 118472217
chr1 226872525 226872535 TCF4 JASPAR yes 118472218
chr1 226872527 226872536 ZEB1 JASPAR yes 35832657
chr1 226872527 226872536 ZEB1 JASPAR yes 118472219
chr1 226872528 226872536 TBX15 JASPAR yes 35832658
chr1 226872528 226872536 TBX15 JASPAR yes 118472220
chr1 226872529 226872534 SP1 TRANSFAC yes 35832659
chr1 226872529 226872534 SP1 TRANSFAC yes 118472221
chr1 226872531 226872546 HNF4G JASPAR yes 35832660
chr1 226872531 226872546 HNF4G JASPAR yes 118472222
chr1 226872532 226872546 NR2F1 JASPAR yes 35832661
chr1 226872532 226872546 NR2F1 JASPAR yes 118472223
chr1 226872532 226872547 HNF4A JASPAR yes 35832662
chr1 226872532 226872547 HNF4A JASPAR yes 118472224
chr1 226872550 226872556 NFIC JASPAR yes 35832663
chr1 226872550 226872556 NFIC JASPAR yes 118472225
SNP sites on vista5376[chr1:226872188-226872557]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226872364 rs3768389 T A,C
POU1F1
993837
chr1 226872484 rs61835598 A G no 993838
chr1 226872515 rs3768390 C G
EBF1
993839
chr1 226872523 rs114632639 G A
EBF1
993840
Genes possibly regulated by vista5376[chr1:226872188-226872557]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226819391 226927024 - ITPKB ENSG00000143772.5 226927024 0.8 0.99 1902 45533
Expression level of Genes
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miRNAs possibly regulated by vista5376[chr1:226872188-226872557]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results