EnhancerDB
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  3. rs3768389[chr1:226872364]
Enhancers that have rs3768389[chr1:226872364]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226872188 226872557 vista5376
VISTA
Transcript factors that have rs3768389[chr1:226872364]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226869651 226872828 ZNF274 GTRD no Bone Marrow (K562) 107875965
chr1 226869651 226872828 ZNF274 GTRD no Bone Marrow (K562) 107875966
chr1 226869673 226873033 ZNF274 GTRD no Bone Marrow (K562) 107875967
chr1 226869673 226873033 ZNF274 GTRD no Bone Marrow (K562) 107875968
chr1 226871537 226872715 ZNF274 GTRD no Bone Marrow (K562) 107876168
chr1 226871808 226872367 ZNF274 GTRD no Bone Marrow (K562) 107876170
chr1 226872172 226873035 ZNF274 GTRD no Bone Marrow (K562) 107876171
chr1 226872350 226872364 POU1F1 JASPAR yes 35832643
chr1 226872350 226872364 POU1F1 JASPAR yes 118472205
chr1 226872353 226872995 ZNF274 GTRD no Bone Marrow (K562) 107876172
Genes associated with rs3768389[chr1:226872364], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More