EnhancerDB
  1. Home
  2. Enhancers
  3. vista5379[chr1:226876730-226876990]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5379[chr1:226876730-226876990]
Back to top
Tissue distribution of vista5379
Back to top
Transcription factor that possibly regulate vista5379[chr1:226876730-226876990]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226876758 226876770 POU2F1 JASPAR yes 35833284
chr1 226876758 226876770 POU2F1 JASPAR yes 118472345
chr1 226876758 226876771 POU3F3 JASPAR yes 35833285
chr1 226876758 226876771 POU3F3 JASPAR yes 118472346
chr1 226876758 226876772 POU1F1 JASPAR yes 35833286
chr1 226876758 226876772 POU1F1 JASPAR yes 118472347
chr1 226876759 226876771 POU3F1 JASPAR yes 35833287
chr1 226876759 226876771 POU3F2 JASPAR yes 35833288
chr1 226876759 226876771 POU3F1 JASPAR yes 118472348
chr1 226876759 226876771 POU3F2 JASPAR yes 118472349
chr1 226876759 226876772 POU2F2 JASPAR yes 35833289
chr1 226876759 226876772 POU2F2 JASPAR yes 118472350
chr1 226876762 226876773 NFKB1 JASPAR yes 35833290
chr1 226876762 226876773 NFKB1 JASPAR yes 118472351
chr1 226876787 226876792 GATA2 JASPAR yes 35833291
chr1 226876787 226876792 GATA2 JASPAR yes 118472352
chr1 226876798 226876807 NFIX JASPAR yes 35833292
chr1 226876798 226876807 NFIX JASPAR yes 118472353
chr1 226876798 226876808 NFIA JASPAR yes 35833293
chr1 226876798 226876808 NFIA JASPAR yes 118472354
chr1 226876800 226876806 NFIC JASPAR yes 35833294
chr1 226876800 226876806 NFIC JASPAR yes 118472355
chr1 226876805 226876817 PKNOX1 JASPAR yes 35833295
chr1 226876805 226876817 PKNOX2 JASPAR yes 35833296
chr1 226876805 226876817 TGIF1 JASPAR yes 35833297
chr1 226876805 226876817 TGIF2 JASPAR yes 35833298
chr1 226876805 226876817 PKNOX1 JASPAR yes 118472356
chr1 226876805 226876817 PKNOX2 JASPAR yes 118472357
chr1 226876805 226876817 TGIF1 JASPAR yes 118472358
chr1 226876805 226876817 TGIF2 JASPAR yes 118472359
chr1 226876818 226876832 RORA JASPAR yes 35833299
chr1 226876818 226876832 RORA JASPAR yes 118472360
chr1 226876820 226876835 MEF2A JASPAR yes 35833300
chr1 226876820 226876835 MEF2A JASPAR yes 118472361
chr1 226876821 226876836 MEF2C JASPAR yes 35833301
chr1 226876821 226876836 MEF2C JASPAR yes 118472362
chr1 226876822 226876834 MEF2A JASPAR yes 35833302
chr1 226876822 226876834 MEF2B JASPAR yes 35833303
chr1 226876822 226876834 MEF2D JASPAR yes 35833304
chr1 226876822 226876834 MEF2A JASPAR yes 118472363
chr1 226876822 226876834 MEF2B JASPAR yes 118472364
chr1 226876822 226876834 MEF2D JASPAR yes 118472365
chr1 226876823 226876833 MEF2A JASPAR yes 35833305
chr1 226876823 226876833 MEF2A JASPAR yes 118472366
chr1 226876824 226876828 YY1 TRANSFAC yes 35833306
chr1 226876824 226876828 YY1 TRANSFAC yes 118472367
chr1 226876825 226876839 NR2F1 JASPAR yes 35833307
chr1 226876825 226876839 NR2F1 JASPAR yes 118472368
chr1 226876836 226876852 NFYA JASPAR yes 35833308
chr1 226876836 226876852 NFYA JASPAR yes 118472369
chr1 226876837 226876855 NFYA JASPAR yes 35833309
chr1 226876837 226876855 NFYA JASPAR yes 118472370
chr1 226876841 226876845 H1TF2 TRANSFAC yes 35833310
chr1 226876841 226876845 NFE TRANSFAC yes 35833311
chr1 226876841 226876845 SRF TRANSFAC yes 35833312
chr1 226876841 226876845 H1TF2 TRANSFAC yes 118472371
chr1 226876841 226876845 NFE TRANSFAC yes 118472372
chr1 226876841 226876845 SRF TRANSFAC yes 118472373
chr1 226876863 226876878 RUNX2 JASPAR yes 35833313
chr1 226876863 226876878 RUNX2 JASPAR yes 118472374
chr1 226876873 226876879 SOX10 JASPAR yes 35833314
chr1 226876873 226876879 SOX10 JASPAR yes 118472375
chr1 226876879 226876883 LFA1 TRANSFAC yes 35833315
chr1 226876879 226876883 LFA1 TRANSFAC yes 118472376
chr1 226876895 226876910 JUND JASPAR yes 35833316
chr1 226876895 226876910 JUND JASPAR yes 118472377
chr1 226876896 226876906 POU6F2 JASPAR yes 35833317
chr1 226876896 226876906 POU6F2 JASPAR yes 118472378
chr1 226876896 226876909 JUN JASPAR yes 35833318
chr1 226876896 226876909 JUN JASPAR yes 118472379
chr1 226876912 226876927 STAT2 JASPAR yes 35833319
chr1 226876912 226876927 STAT2 JASPAR yes 118472380
chr1 226876915 226876927 IRF1 JASPAR yes 35833320
chr1 226876915 226876927 IRF1 JASPAR yes 118472381
chr1 226876917 226876923 TCF4 TRANSFAC yes 35833321
chr1 226876917 226876923 TCF4 TRANSFAC yes 118472382
chr1 226876917 226876932 FOXP1 JASPAR yes 35833322
chr1 226876917 226876932 FOXP1 JASPAR yes 118472383
chr1 226876928 226876941 HSF1 JASPAR yes 35833323
chr1 226876928 226876941 HSF2 JASPAR yes 35833324
chr1 226876928 226876941 HSF1 JASPAR yes 118472384
chr1 226876928 226876941 HSF2 JASPAR yes 118472385
chr1 226876929 226876945 SOX8 JASPAR yes 35833325
chr1 226876929 226876945 SOX8 JASPAR yes 118472386
chr1 226876933 226876946 HSF1 JASPAR yes 35833326
chr1 226876933 226876946 HSF1 JASPAR yes 118472387
chr1 226876942 226876952 MZF1 JASPAR yes 35833327
chr1 226876942 226876952 MZF1 JASPAR yes 118472388
chr1 226876948 226876960 FOXI1 JASPAR yes 35833328
chr1 226876948 226876960 FOXI1 JASPAR yes 118472389
chr1 226876949 226876963 FOXF2 JASPAR yes 35833329
chr1 226876949 226876963 FOXF2 JASPAR yes 118472390
chr1 226876951 226876963 FOXC2 JASPAR yes 35833330
chr1 226876951 226876963 FOXC2 JASPAR yes 118472391
chr1 226876952 226876964 FOXI1 JASPAR yes 35833331
chr1 226876952 226876964 FOXI1 JASPAR yes 118472392
chr1 226876969 226876975 TCF1 TRANSFAC yes 35833332
chr1 226876969 226876975 TCF1 TRANSFAC yes 118472393
chr1 226876969 226876976 TCF4 TRANSFAC yes 35833333
chr1 226876969 226876976 TCF4 TRANSFAC yes 118472394
SNP sites on vista5379[chr1:226876730-226876990]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226876752 rs578258287 G A no 993879
chr1 226876765 rs77565169 A C
NFKB1 POU1F1 POU2F1 POU2F2 POU3F1 POU3F2 POU3F3
993880
chr1 226876905 rs200535603 GC G
JUN JUND POU6F2
993881
Genes possibly regulated by vista5379[chr1:226876730-226876990]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226819391 226927024 - ITPKB ENSG00000143772.5 226927024 0.8 0.99 1902 49966
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5379[chr1:226876730-226876990]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results