EnhancerDB
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  3. rs200535603[chr1:226876905]
Enhancers that have rs200535603[chr1:226876905]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226876730 226876990 vista5379
VISTA
Transcript factors that have rs200535603[chr1:226876905]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226876895 226876910 JUND JASPAR yes 35833316
chr1 226876895 226876910 JUND JASPAR yes 118472377
chr1 226876896 226876906 POU6F2 JASPAR yes 35833317
chr1 226876896 226876906 POU6F2 JASPAR yes 118472378
chr1 226876896 226876909 JUN JASPAR yes 35833318
chr1 226876896 226876909 JUN JASPAR yes 118472379
Genes associated with rs200535603[chr1:226876905], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More