EnhancerDB
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  3. vista5382[chr1:226890098-226890374]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5382[chr1:226890098-226890374]
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Tissue distribution of vista5382
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Transcription factor that possibly regulate vista5382[chr1:226890098-226890374]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226890097 226890103 ETS1 JASPAR yes 35835268
chr1 226890097 226890103 ETS1 JASPAR yes 118472502
chr1 226890098 226890113 FOXP1 JASPAR yes 35835269
chr1 226890098 226890113 FOXP1 JASPAR yes 118472503
chr1 226890099 226890114 FOXP1 JASPAR yes 35835270
chr1 226890099 226890114 FOXP1 JASPAR yes 118472504
chr1 226890099 226890120 IRF1 JASPAR yes 35835271
chr1 226890099 226890120 IRF1 JASPAR yes 118472505
chr1 226890100 226890115 FOXP1 JASPAR yes 35835272
chr1 226890100 226890115 FOXP1 JASPAR yes 118472506
chr1 226890100 226890121 IRF1 JASPAR yes 35835273
chr1 226890100 226890121 IRF1 JASPAR yes 118472507
chr1 226890101 226890116 FOXP1 JASPAR yes 35835274
chr1 226890101 226890116 FOXP1 JASPAR yes 118472508
chr1 226890102 226890117 FOXP1 JASPAR yes 35835275
chr1 226890102 226890117 FOXP1 JASPAR yes 118472509
chr1 226890104 226890119 PRDM1 JASPAR yes 35835276
chr1 226890104 226890119 PRDM1 JASPAR yes 118472510
chr1 226890106 226890127 IRF1 JASPAR yes 35835277
chr1 226890106 226890127 IRF1 JASPAR yes 118472511
chr1 226890110 226890124 SPI1 JASPAR yes 35835278
chr1 226890110 226890124 SPIC JASPAR yes 35835279
chr1 226890110 226890124 STAT1 JASPAR yes 35835280
chr1 226890110 226890124 SPI1 JASPAR yes 118472512
chr1 226890110 226890124 SPIC JASPAR yes 118472513
chr1 226890110 226890124 STAT1 JASPAR yes 118472514
chr1 226890110 226890125 PRDM1 JASPAR yes 35835281
chr1 226890110 226890125 STAT2 JASPAR yes 35835282
chr1 226890110 226890125 PRDM1 JASPAR yes 118472515
chr1 226890110 226890125 STAT2 JASPAR yes 118472516
chr1 226890111 226890126 HNF4G JASPAR yes 35835283
chr1 226890111 226890126 HNF4G JASPAR yes 118472517
chr1 226890115 226890126 NFKB1 JASPAR yes 35835284
chr1 226890115 226890126 NFKB1 JASPAR yes 118472518
chr1 226890142 226890146 YY1 TRANSFAC yes 35835285
chr1 226890142 226890146 YY1 TRANSFAC yes 118472519
chr1 226890142 226890153 CEBPB JASPAR yes 35835286
chr1 226890142 226890153 CEBPB JASPAR yes 118472520
chr1 226890142 226890155 ATF4 JASPAR yes 35835287
chr1 226890142 226890155 ATF4 JASPAR yes 118472521
chr1 226890143 226890156 JUN JASPAR yes 35835288
chr1 226890143 226890156 JUN JASPAR yes 118472522
chr1 226890192 226890196 NFE TRANSFAC yes 35835289
chr1 226890192 226890196 NFE TRANSFAC yes 118472523
chr1 226890193 226890198 GATA2 JASPAR yes 35835290
chr1 226890193 226890198 GATA2 JASPAR yes 118472524
chr1 226890201 226890216 JUND JASPAR yes 35835291
chr1 226890201 226890216 JUND JASPAR yes 118472525
chr1 226890202 226890215 NR2F1 JASPAR yes 35835292
chr1 226890202 226890215 NR2F1 JASPAR yes 118472526
chr1 226890203 226890217 ATF7 JASPAR yes 35835293
chr1 226890203 226890217 ATF7 JASPAR yes 118472527
chr1 226890204 226890216 JDP2 JASPAR yes 35835294
chr1 226890204 226890216 JDP2 JASPAR yes 118472528
chr1 226890204 226890219 JUND JASPAR yes 35835295
chr1 226890204 226890219 JUND JASPAR yes 118472529
chr1 226890205 226890218 JUN JASPAR yes 35835296
chr1 226890205 226890218 JUN JASPAR yes 118472530
chr1 226890206 226890214 CREB1 JASPAR yes 35835297
chr1 226890206 226890214 CREB1 JASPAR yes 118472531
chr1 226890220 226890224 NFE TRANSFAC yes 35835298
chr1 226890220 226890224 NFE TRANSFAC yes 118472532
chr1 226890220 226890225 GATA1 TRANSFAC yes 35835299
chr1 226890220 226890225 GATA1 TRANSFAC yes 118472533
chr1 226890220 226890226 GATA3 JASPAR yes 35835300
chr1 226890220 226890226 GATA3 JASPAR yes 118472534
chr1 226890230 226890236 SOX10 JASPAR yes 35835301
chr1 226890230 226890236 SOX10 JASPAR yes 118472535
chr1 226890234 226890254 TP63 JASPAR yes 35835302
chr1 226890234 226890254 TP63 JASPAR yes 118472536
chr1 226890238 226890251 SCRT2 JASPAR yes 35835303
chr1 226890238 226890251 SCRT2 JASPAR yes 118472537
chr1 226890241 226890254 ZBTB18 JASPAR yes 35835304
chr1 226890241 226890254 ZBTB18 JASPAR yes 118472538
chr1 226890248 226890262 TLX1 JASPAR yes 35835305
chr1 226890248 226890262 TLX1 JASPAR yes 118472539
chr1 226890310 226890318 RHOXF1 JASPAR yes 35835306
chr1 226890310 226890318 RHOXF1 JASPAR yes 118472540
chr1 226890310 226890323 DUXA JASPAR yes 35835307
chr1 226890310 226890323 DUXA JASPAR yes 118472541
chr1 226890311 226890322 DUX4 JASPAR yes 35835308
chr1 226890311 226890322 PHOX2A JASPAR yes 35835309
chr1 226890311 226890322 PROP1 JASPAR yes 35835310
chr1 226890311 226890322 DUX4 JASPAR yes 118472542
chr1 226890311 226890322 PHOX2A JASPAR yes 118472543
chr1 226890311 226890322 PROP1 JASPAR yes 118472544
chr1 226890315 226890319 H1TF2 TRANSFAC yes 35835311
chr1 226890315 226890319 NFE TRANSFAC yes 35835312
chr1 226890315 226890319 SRF TRANSFAC yes 35835313
chr1 226890315 226890319 H1TF2 TRANSFAC yes 118472545
chr1 226890315 226890319 NFE TRANSFAC yes 118472546
chr1 226890315 226890319 SRF TRANSFAC yes 118472547
chr1 226890320 226890324 YY1 TRANSFAC yes 35835314
chr1 226890320 226890324 YY1 TRANSFAC yes 118472548
chr1 226890332 226890338 HiNF-A TRANSFAC yes 35835315
chr1 226890332 226890338 HiNF-A TRANSFAC yes 118472549
SNP sites on vista5382[chr1:226890098-226890374]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226890248 rs139253224 C T
SCRT2 TLX1 TP63 ZBTB18
994020
chr1 226890272 rs149648336 G A no 994021
chr1 226890275 rs144371228 C G no 994022
Genes possibly regulated by vista5382[chr1:226890098-226890374]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226819391 226927024 - ITPKB ENSG00000143772.5 226927024 0.8 0.99 1902 63350
Expression level of Genes
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miRNAs possibly regulated by vista5382[chr1:226890098-226890374]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results