EnhancerDB
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  3. vista5432[chr1:228962635-228963190]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5432[chr1:228962635-228963190]
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Tissue distribution of vista5432
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Transcription factor that possibly regulate vista5432[chr1:228962635-228963190]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 228962658 228963074 STAT1 UCSC Txn Factor no Conserved 107877436
chr1 228962641 228962653 GRHL1 JASPAR yes 35932565
chr1 228962641 228962653 GRHL1 JASPAR yes 118474699
chr1 228962642 228962645 MYB TRANSFAC yes 35932566
chr1 228962642 228962645 MYB TRANSFAC yes 118474700
chr1 228962642 228962652 TFCP2 JASPAR yes 35932567
chr1 228962642 228962652 TFCP2 JASPAR yes 118474701
chr1 228962646 228962661 STAT1 JASPAR yes 35932568
chr1 228962646 228962661 STAT1 JASPAR yes 118474702
chr1 228962647 228962668 MAFG JASPAR yes 35932569
chr1 228962647 228962668 MAFG JASPAR yes 118474703
chr1 228962648 228962659 STAT1 JASPAR yes 35932570
chr1 228962648 228962659 STAT3 JASPAR yes 35932571
chr1 228962648 228962659 STAT1 JASPAR yes 118474704
chr1 228962648 228962659 STAT3 JASPAR yes 118474705
chr1 228962652 228962670 MAFF JASPAR yes 35932572
chr1 228962652 228962670 MAFF JASPAR yes 118474706
chr1 228962653 228962668 MAFK JASPAR yes 35932573
chr1 228962653 228962668 MAFK JASPAR yes 118474707
chr1 228962657 228962668 NRL JASPAR yes 35932574
chr1 228962657 228962668 NRL JASPAR yes 118474708
chr1 228962690 228962696 SOX10 JASPAR yes 35932575
chr1 228962690 228962696 SOX10 JASPAR yes 118474709
chr1 228962691 228962706 MAFK JASPAR yes 35932576
chr1 228962691 228962706 MAFK JASPAR yes 118474710
chr1 228962695 228962705 SREBF1 JASPAR yes 35932577
chr1 228962695 228962705 SREBF2 JASPAR yes 35932578
chr1 228962695 228962705 SREBF1 JASPAR yes 118474711
chr1 228962695 228962705 SREBF2 JASPAR yes 118474712
chr1 228962697 228962714 ESR1 JASPAR yes 35932579
chr1 228962697 228962714 ESR1 JASPAR yes 118474713
chr1 228962714 228962718 H4TF2 TRANSFAC yes 35932580
chr1 228962714 228962718 H4TF2 TRANSFAC yes 118474714
chr1 228962716 228962727 E2F6 JASPAR yes 35932581
chr1 228962716 228962727 E2F6 JASPAR yes 118474715
chr1 228962763 228962778 LEF1 JASPAR yes 35932582
chr1 228962763 228962778 LEF1 JASPAR yes 118474716
chr1 228962764 228962778 TCF7L2 JASPAR yes 35932583
chr1 228962764 228962778 TCF7L2 JASPAR yes 118474717
chr1 228962767 228962773 LEF1 TRANSFAC yes 35932584
chr1 228962767 228962773 TCF4 TRANSFAC yes 35932585
chr1 228962767 228962773 LEF1 TRANSFAC yes 118474718
chr1 228962767 228962773 TCF4 TRANSFAC yes 118474719
chr1 228962769 228962786 BCL6B JASPAR yes 35932586
chr1 228962769 228962786 BCL6B JASPAR yes 118474720
chr1 228962775 228962785 NFATC3 JASPAR yes 35932587
chr1 228962775 228962785 NFATC3 JASPAR yes 118474721
chr1 228962777 228962784 NFATC2 JASPAR yes 35932588
chr1 228962777 228962784 NFATC2 JASPAR yes 118474722
chr1 228962796 228962800 YY1 TRANSFAC yes 35932589
chr1 228962796 228962800 YY1 TRANSFAC yes 118474723
chr1 228962801 228962806 GATA2 JASPAR yes 35932590
chr1 228962801 228962806 GATA2 JASPAR yes 118474724
chr1 228962821 228962831 NFIA JASPAR yes 35932591
chr1 228962821 228962831 NFIA JASPAR yes 118474725
chr1 228962822 228962831 NFIX JASPAR yes 35932592
chr1 228962822 228962831 NFIX JASPAR yes 118474726
chr1 228962823 228962829 NFIC JASPAR yes 35932593
chr1 228962823 228962829 NFIC JASPAR yes 118474727
chr1 228962833 228962837 YY1 TRANSFAC yes 35932594
chr1 228962833 228962837 YY1 TRANSFAC yes 118474728
chr1 228962834 228962844 LHX6 JASPAR yes 35932595
chr1 228962834 228962844 LHX6 JASPAR yes 118474729
chr1 228962860 228962881 IRF1 JASPAR yes 35932596
chr1 228962860 228962881 IRF1 JASPAR yes 118474730
chr1 228962862 228962877 IRF9 JASPAR yes 35932597
chr1 228962862 228962877 IRF9 JASPAR yes 118474731
chr1 228962863 228962877 IRF7 JASPAR yes 35932598
chr1 228962863 228962877 IRF8 JASPAR yes 35932599
chr1 228962863 228962877 IRF7 JASPAR yes 118474732
chr1 228962863 228962877 IRF8 JASPAR yes 118474733
chr1 228962868 228962878 ETV3 JASPAR yes 35932600
chr1 228962868 228962878 ETV3 JASPAR yes 118474734
chr1 228962880 228962891 STAT3 JASPAR yes 35932601
chr1 228962880 228962891 STAT3 JASPAR yes 118474735
chr1 228962890 228962901 USF1 JASPAR yes 35932602
chr1 228962890 228962901 USF2 JASPAR yes 35932603
chr1 228962890 228962901 USF1 JASPAR yes 118474736
chr1 228962890 228962901 USF2 JASPAR yes 118474737
chr1 228962936 228962952 NFYA JASPAR yes 35932604
chr1 228962936 228962952 NFYA JASPAR yes 118474738
chr1 228962939 228962954 NFYB JASPAR yes 35932605
chr1 228962939 228962954 NFYB JASPAR yes 118474739
chr1 228962948 228962951 MYB TRANSFAC yes 35932606
chr1 228962948 228962951 MYB TRANSFAC yes 118474740
chr1 228962970 228962975 GATA2 JASPAR yes 35932607
chr1 228962970 228962975 GATA2 JASPAR yes 118474741
chr1 228962995 228963007 GLI2 JASPAR yes 35932608
chr1 228962995 228963007 GLI2 JASPAR yes 118474742
chr1 228963007 228963021 TCF7L2 JASPAR yes 35932609
chr1 228963007 228963021 TCF7L2 JASPAR yes 118474743
chr1 228963007 228963022 LEF1 JASPAR yes 35932610
chr1 228963007 228963022 LEF1 JASPAR yes 118474744
chr1 228963048 228963060 TAL1 JASPAR yes 35932611
chr1 228963048 228963060 TAL1 JASPAR yes 118474745
chr1 228963048 228963061 ZBTB18 JASPAR yes 35932612
chr1 228963048 228963061 ZBTB18 JASPAR yes 118474746
chr1 228963049 228963061 NHLH1 JASPAR yes 35932613
chr1 228963049 228963061 NHLH1 JASPAR yes 118474747
chr1 228963050 228963060 FIGLA JASPAR yes 35932614
chr1 228963050 228963060 MSC JASPAR yes 35932615
chr1 228963050 228963060 TFAP4 JASPAR yes 35932616
chr1 228963050 228963060 FIGLA JASPAR yes 118474748
chr1 228963050 228963060 MSC JASPAR yes 118474749
chr1 228963050 228963060 TFAP4 JASPAR yes 118474750
chr1 228963052 228963066 RORA JASPAR yes 35932617
chr1 228963052 228963066 RORA JASPAR yes 118474751
chr1 228963058 228963064 ESR1 TRANSFAC yes 35932618
chr1 228963058 228963064 ESR1 TRANSFAC yes 118474752
chr1 228963060 228963064 ESR1 TRANSFAC yes 35932619
chr1 228963060 228963064 ESR1 TRANSFAC yes 118474753
chr1 228963063 228963067 YY1 TRANSFAC yes 35932620
chr1 228963063 228963067 YY1 TRANSFAC yes 118474754
chr1 228963073 228963080 SPI1 JASPAR yes 35932621
chr1 228963073 228963080 SPI1 JASPAR yes 118474755
chr1 228963107 228963112 TFAP2A TRANSFAC yes 35932622
chr1 228963107 228963112 TFAP2A TRANSFAC yes 118474756
chr1 228963107 228963113 MZF1 JASPAR yes 35932623
chr1 228963107 228963113 MZF1 JASPAR yes 118474757
chr1 228963149 228963164 JUND JASPAR yes 35932624
chr1 228963149 228963164 JUND JASPAR yes 118474758
chr1 228963169 228963187 NR3C1 JASPAR yes 35932625
chr1 228963169 228963187 NR3C1 JASPAR yes 118474759
chr1 228963172 228963187 STAT2 JASPAR yes 35932626
chr1 228963172 228963187 STAT2 JASPAR yes 118474760
chr1 228963175 228963190 FOXP1 JASPAR yes 35932627
chr1 228963175 228963190 FOXP1 JASPAR yes 118474761
chr1 228963176 228963191 FOXP1 JASPAR yes 35932628
chr1 228963176 228963191 FOXP1 JASPAR yes 118474762
chr1 228963189 228963195 GATA3 JASPAR yes 35932629
chr1 228963189 228963195 GATA3 JASPAR yes 118474763
SNP sites on vista5432[chr1:228962635-228963190]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 228962722 rs76455656 C T
E2F6 STAT1
1004721
chr1 228962724 rs548941103 T G
E2F6 STAT1
1004722
chr1 228962760 rs55849692 C T
STAT1
1004723
chr1 228962776 rs185672299 C A
BCL6B LEF1 NFATC3 STAT1 TCF7L2
1004724
chr1 228962922 rs6695176 T C
STAT1
1004725
chr1 228963004 rs148581636 G T
GLI2 STAT1
1004726
Genes possibly regulated by vista5432[chr1:228962635-228963190]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 228870824 228882416 + RHOU ENSG00000116574.4 228870824 0.7 0.97 1927 8189
Expression level of Genes
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miRNAs possibly regulated by vista5432[chr1:228962635-228963190]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results