EnhancerDB
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  3. rs185672299[chr1:228962776]
Enhancers that have rs185672299[chr1:228962776]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
chr1 228962635 228963190 vista5432
VISTA
Transcript factors that have rs185672299[chr1:228962776]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228962658 228963074 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388784
chr1 228962658 228963074 STAT1 UCSC Txn Factor no Conserved 107877436
chr1 228962658 228963074 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877437
chr1 228962753 228963109 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877438
chr1 228962763 228962778 LEF1 JASPAR yes 35932582
chr1 228962763 228962778 LEF1 JASPAR yes 118474716
chr1 228962764 228962778 TCF7L2 JASPAR yes 35932583
chr1 228962764 228962778 TCF7L2 JASPAR yes 118474717
chr1 228962769 228962786 BCL6B JASPAR yes 35932586
chr1 228962769 228962786 BCL6B JASPAR yes 118474720
chr1 228962775 228962785 NFATC3 JASPAR yes 35932587
chr1 228962775 228962785 NFATC3 JASPAR yes 118474721
Genes associated with rs185672299[chr1:228962776], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More