EnhancerDB
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  3. vista5435[chr1:228973832-228974198]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5435[chr1:228973832-228974198]
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Tissue distribution of vista5435
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Transcription factor that possibly regulate vista5435[chr1:228973832-228974198]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 228973020 228974092 POLR2A UCSC Txn Factor no Conserved 107877499
chr1 228974151 228974551 FOS UCSC Txn Factor no Conserved 107877537
chr1 228974197 228974515 TCF12 UCSC Txn Factor no Conserved 107877547
chr1 228973825 228973833 MEIS2 JASPAR yes 35934220
chr1 228973825 228973833 MEIS3 JASPAR yes 35934221
chr1 228973825 228973833 MEIS2 JASPAR yes 118474811
chr1 228973825 228973833 MEIS3 JASPAR yes 118474812
chr1 228973839 228973843 YY1 TRANSFAC yes 35934222
chr1 228973839 228973843 YY1 TRANSFAC yes 118474813
chr1 228973860 228973876 SOX8 JASPAR yes 35934223
chr1 228973860 228973876 SOX8 JASPAR yes 118474814
chr1 228973872 228973887 HNF1A JASPAR yes 35934224
chr1 228973872 228973887 HNF1A JASPAR yes 118474815
chr1 228973873 228973885 HNF1B JASPAR yes 35934225
chr1 228973873 228973885 HNF1B JASPAR yes 118474816
chr1 228973873 228973886 HNF1B JASPAR yes 35934226
chr1 228973873 228973886 HNF1B JASPAR yes 118474817
chr1 228973874 228973886 HNF1B JASPAR yes 35934227
chr1 228973874 228973886 HNF1B JASPAR yes 118474818
chr1 228973882 228973885 MYB TRANSFAC yes 35934228
chr1 228973882 228973885 MYB TRANSFAC yes 118474819
chr1 228973897 228973903 SOX10 JASPAR yes 35934229
chr1 228973897 228973903 SOX10 JASPAR yes 118474820
chr1 228973909 228973922 NR2F1 JASPAR yes 35934230
chr1 228973909 228973922 NR2F1 JASPAR yes 118474821
chr1 228973915 228973926 EBF1 JASPAR yes 35934231
chr1 228973915 228973926 EBF1 JASPAR yes 118474822
chr1 228973951 228973962 NFE2L2 JASPAR yes 35934232
chr1 228973951 228973962 NFE2L2 JASPAR yes 118474823
chr1 228973975 228973985 NEUROG2 JASPAR yes 35934233
chr1 228973975 228973985 NEUROG2 JASPAR yes 118474824
chr1 228973978 228973988 MEF2A JASPAR yes 35934234
chr1 228973978 228973988 MEF2A JASPAR yes 118474825
chr1 228973981 228973985 YY1 TRANSFAC yes 35934235
chr1 228973981 228973985 YY1 TRANSFAC yes 118474826
chr1 228974030 228974045 RFX5 JASPAR yes 35934236
chr1 228974030 228974045 RFX5 JASPAR yes 118474827
chr1 228974058 228974062 YY1 TRANSFAC yes 35934237
chr1 228974058 228974062 YY1 TRANSFAC yes 118474828
chr1 228974070 228974075 GATA2 JASPAR yes 35934238
chr1 228974070 228974075 GATA2 JASPAR yes 118474829
chr1 228974070 228974090 TP63 JASPAR yes 35934239
chr1 228974070 228974090 TP63 JASPAR yes 118474830
chr1 228974071 228974089 TP53 JASPAR yes 35934240
chr1 228974071 228974089 TP53 JASPAR yes 118474831
chr1 228974073 228974088 TP53 JASPAR yes 35934241
chr1 228974073 228974088 TP53 JASPAR yes 118474832
chr1 228974091 228974103 NHLH1 JASPAR yes 35934242
chr1 228974091 228974103 NHLH1 JASPAR yes 118474833
chr1 228974092 228974102 NHLH1 JASPAR yes 35934243
chr1 228974092 228974102 NHLH1 JASPAR yes 118474834
chr1 228974105 228974110 ETS2 TRANSFAC yes 35934244
chr1 228974105 228974110 ETS2 TRANSFAC yes 118474835
chr1 228974113 228974131 MAFF JASPAR yes 35934245
chr1 228974113 228974131 MAFF JASPAR yes 118474836
chr1 228974115 228974126 NRL JASPAR yes 35934246
chr1 228974115 228974126 NRL JASPAR yes 118474837
chr1 228974115 228974130 MAFK JASPAR yes 35934247
chr1 228974115 228974130 MAFK JASPAR yes 118474838
chr1 228974132 228974143 NFIL3 JASPAR yes 35934248
chr1 228974132 228974143 NFIL3 JASPAR yes 118474839
chr1 228974132 228974146 ATF7 JASPAR yes 35934249
chr1 228974132 228974146 ATF7 JASPAR yes 118474840
chr1 228974133 228974144 CEBPB JASPAR yes 35934250
chr1 228974133 228974144 CEBPB JASPAR yes 118474841
chr1 228974133 228974145 DBP JASPAR yes 35934251
chr1 228974133 228974145 HLF JASPAR yes 35934252
chr1 228974133 228974145 JDP2 JASPAR yes 35934253
chr1 228974133 228974145 TEF JASPAR yes 35934254
chr1 228974133 228974145 DBP JASPAR yes 118474842
chr1 228974133 228974145 HLF JASPAR yes 118474843
chr1 228974133 228974145 JDP2 JASPAR yes 118474844
chr1 228974133 228974145 TEF JASPAR yes 118474845
chr1 228974133 228974146 ATF4 JASPAR yes 35934255
chr1 228974133 228974146 ATF4 JASPAR yes 118474846
chr1 228974133 228974148 JUND JASPAR yes 35934256
chr1 228974133 228974148 JUND JASPAR yes 118474847
chr1 228974134 228974147 JUN JASPAR yes 35934257
chr1 228974134 228974147 JUN JASPAR yes 118474848
chr1 228974138 228974158 TBX19 JASPAR yes 35934258
chr1 228974138 228974158 TBX19 JASPAR yes 118474849
chr1 228974139 228974151 HNF1B JASPAR yes 35934259
chr1 228974139 228974151 HNF1B JASPAR yes 118474850
chr1 228974140 228974156 T JASPAR yes 35934260
chr1 228974140 228974156 T JASPAR yes 118474851
chr1 228974147 228974162 HNF4G JASPAR yes 35934261
chr1 228974147 228974162 HNF4G JASPAR yes 118474852
chr1 228974148 228974163 HNF4A JASPAR yes 35934262
chr1 228974148 228974163 HNF4A JASPAR yes 118474853
chr1 228974151 228974157 TCF4 TRANSFAC yes 35934263
chr1 228974151 228974157 TCF4 TRANSFAC yes 118474854
chr1 228974164 228974173 VENTX JASPAR yes 35934264
chr1 228974164 228974173 VENTX JASPAR yes 118474855
chr1 228974167 228974171 YY1 TRANSFAC yes 35934265
chr1 228974167 228974171 YY1 TRANSFAC yes 118474856
chr1 228974169 228974187 MAFF JASPAR yes 35934266
chr1 228974169 228974187 MAFF JASPAR yes 118474857
chr1 228974171 228974192 MAFG JASPAR yes 35934267
chr1 228974171 228974192 MAFG JASPAR yes 118474858
chr1 228974189 228974206 RXRA JASPAR yes 35934268
chr1 228974189 228974206 RXRA JASPAR yes 118474859
SNP sites on vista5435[chr1:228973832-228974198]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 228973836 rs2639741 A C
POLR2A
1004938
chr1 228973854 rs2131443 A G
POLR2A
1004939
chr1 228973941 rs2639740 C G,T
POLR2A
1004940
Genes possibly regulated by vista5435[chr1:228973832-228974198]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5435[chr1:228973832-228974198]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results