EnhancerDB
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  3. rs2639740[chr1:228973941]
Enhancers that have rs2639740[chr1:228973941]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
chr1 228973832 228974198 vista5435
VISTA
Transcript factors that have rs2639740[chr1:228973941]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228973020 228974092 POLR2A UCSC Txn Factor no Conserved 107877499
chr1 228973570 228974030 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388862
chr1 228973570 228974030 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877500
chr1 228973626 228974037 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388863
chr1 228973626 228974037 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877502
chr1 228973684 228974084 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388864
chr1 228973684 228974084 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877503
chr1 228973688 228973948 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388866
chr1 228973688 228973948 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877505
chr1 228973708 228974068 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388867
chr1 228973708 228974068 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877506
chr1 228973716 228974016 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388868
chr1 228973716 228974016 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877507
chr1 228973724 228973948 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388870
chr1 228973724 228973948 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877509
chr1 228973732 228974068 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388871
chr1 228973732 228974068 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877510
chr1 228973770 228974050 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388872
chr1 228973770 228974050 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877511
chr1 228973775 228974035 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388873
chr1 228973775 228974035 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877512
chr1 228973796 228974146 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107877513
chr1 228973800 228974450 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388874
chr1 228973800 228974450 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877514
chr1 228973812 228974092 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107877515
chr1 228973820 228974276 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388875
chr1 228973820 228974276 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877516
chr1 228973935 228974439 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107877517
Genes associated with rs2639740[chr1:228973941], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More