EnhancerDB
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  3. vista544[chr1:17231253-17231704]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista544[chr1:17231253-17231704]
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Tissue distribution of vista544
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Transcription factor that possibly regulate vista544[chr1:17231253-17231704]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 17230272 17232555 POLR2A UCSC Txn Factor no Conserved 107802244
chr1 17231236 17231253 RARA JASPAR yes 27064107
chr1 17231236 17231253 RARA JASPAR yes 118239854
chr1 17231256 17231274 MAFF JASPAR yes 27064109
chr1 17231256 17231274 MAFF JASPAR yes 118239855
chr1 17231258 17231265 NKX3-1 JASPAR yes 27064110
chr1 17231258 17231265 NKX3-1 JASPAR yes 118239856
chr1 17231271 17231283 E2F8 JASPAR yes 27064111
chr1 17231271 17231283 E2F8 JASPAR yes 118239857
chr1 17231303 17231323 RREB1 JASPAR yes 27064112
chr1 17231303 17231323 RREB1 JASPAR yes 118239858
chr1 17231307 17231313 MZF1 JASPAR yes 27064113
chr1 17231307 17231313 MZF1 JASPAR yes 118239859
chr1 17231319 17231332 SMAD2 JASPAR yes 27064114
chr1 17231319 17231332 SMAD2 JASPAR yes 118239860
chr1 17231332 17231353 ZNF263 JASPAR yes 27064115
chr1 17231332 17231353 ZNF263 JASPAR yes 118239861
chr1 17231343 17231348 SP1 TRANSFAC yes 27064116
chr1 17231343 17231348 SP1 TRANSFAC yes 118239862
chr1 17231343 17231355 HINFP JASPAR yes 27064117
chr1 17231343 17231355 HINFP JASPAR yes 118239863
chr1 17231349 17231354 ATF1 TRANSFAC yes 27064118
chr1 17231349 17231354 ATF1 TRANSFAC yes 118239864
chr1 17231353 17231363 ETV6 JASPAR yes 27064119
chr1 17231353 17231363 ETV6 JASPAR yes 118239865
chr1 17231357 17231370 TFAP2A JASPAR yes 27064120
chr1 17231357 17231370 TFAP2B JASPAR yes 27064121
chr1 17231357 17231370 TFAP2A JASPAR yes 118239866
chr1 17231357 17231370 TFAP2B JASPAR yes 118239867
chr1 17231359 17231365 SP1 TRANSFAC yes 27064122
chr1 17231359 17231365 SP1 TRANSFAC yes 118239868
chr1 17231383 17231388 SP1 TRANSFAC yes 27064123
chr1 17231383 17231388 SP1 TRANSFAC yes 118239869
chr1 17231384 17231394 SREBF1 JASPAR yes 27064124
chr1 17231384 17231394 SREBF1 JASPAR yes 118239870
chr1 17231395 17231416 ZNF263 JASPAR yes 27064125
chr1 17231395 17231416 ZNF263 JASPAR yes 118239871
chr1 17231396 17231403 CEBPA TRANSFAC yes 27064126
chr1 17231396 17231403 CEBPA TRANSFAC yes 118239872
chr1 17231402 17231407 SP1 TRANSFAC yes 27064127
chr1 17231402 17231407 SP1 TRANSFAC yes 118239873
chr1 17231404 17231425 ZNF263 JASPAR yes 27064128
chr1 17231404 17231425 ZNF263 JASPAR yes 118239874
chr1 17231406 17231411 SP1 TRANSFAC yes 27064129
chr1 17231406 17231411 SP1 TRANSFAC yes 118239875
chr1 17231409 17231415 ETS1 JASPAR yes 27064130
chr1 17231409 17231415 SPI1 JASPAR yes 27064131
chr1 17231409 17231415 ETS1 JASPAR yes 118239876
chr1 17231409 17231415 SPI1 JASPAR yes 118239877
chr1 17231422 17231432 SP1 JASPAR yes 27064132
chr1 17231422 17231432 SP1 JASPAR yes 118239878
chr1 17231441 17231456 JUND JASPAR yes 27064133
chr1 17231441 17231456 JUND JASPAR yes 118239879
chr1 17231443 17231457 ATF7 JASPAR yes 27064134
chr1 17231443 17231457 BATF3 JASPAR yes 27064135
chr1 17231443 17231457 ATF7 JASPAR yes 118239880
chr1 17231443 17231457 BATF3 JASPAR yes 118239881
chr1 17231444 17231456 JDP2 JASPAR yes 27064136
chr1 17231444 17231456 JDP2 JASPAR yes 118239882
chr1 17231444 17231459 JUND JASPAR yes 27064137
chr1 17231444 17231459 JUND JASPAR yes 118239883
chr1 17231445 17231458 JUN JASPAR yes 27064138
chr1 17231445 17231458 JUN JASPAR yes 118239884
chr1 17231446 17231453 JUN TRANSFAC yes 27064139
chr1 17231446 17231453 JUN TRANSFAC yes 118239885
chr1 17231467 17231481 POU1F1 JASPAR yes 27064140
chr1 17231467 17231481 POU1F1 JASPAR yes 118239886
chr1 17231499 17231510 YY2 JASPAR yes 27064141
chr1 17231499 17231510 YY2 JASPAR yes 118239887
chr1 17231512 17231517 H4TF1 TRANSFAC yes 27064142
chr1 17231512 17231517 H4TF1 TRANSFAC yes 118239888
chr1 17231513 17231521 FEV JASPAR yes 27064143
chr1 17231513 17231521 FEV JASPAR yes 118239889
chr1 17231586 17231600 PLAG1 JASPAR yes 27064144
chr1 17231586 17231600 PLAG1 JASPAR yes 118239890
chr1 17231598 17231616 NFYA JASPAR yes 27064145
chr1 17231598 17231616 NFYA JASPAR yes 118239891
chr1 17231599 17231604 NFY TRANSFAC yes 27064146
chr1 17231599 17231604 NFY TRANSFAC yes 118239892
chr1 17231601 17231617 NFYA JASPAR yes 27064147
chr1 17231601 17231617 NFYA JASPAR yes 118239893
chr1 17231602 17231607 TFAP2A TRANSFAC yes 27064148
chr1 17231602 17231607 TFAP2A TRANSFAC yes 118239894
chr1 17231602 17231608 MZF1 JASPAR yes 27064149
chr1 17231602 17231608 MZF1 JASPAR yes 118239895
chr1 17231603 17231623 RREB1 JASPAR yes 27064150
chr1 17231603 17231623 RREB1 JASPAR yes 118239896
chr1 17231606 17231611 NFY TRANSFAC yes 27064151
chr1 17231606 17231611 NFY TRANSFAC yes 118239897
chr1 17231627 17231631 LFA1 TRANSFAC yes 27064152
chr1 17231627 17231631 LFA1 TRANSFAC yes 118239898
chr1 17231671 17231676 SP1 TRANSFAC yes 27064153
chr1 17231671 17231676 SP1 TRANSFAC yes 118239899
chr1 17231671 17231677 SP1 TRANSFAC yes 27064154
chr1 17231671 17231677 SP1 TRANSFAC yes 118239900
chr1 17231675 17231680 SP1 TRANSFAC yes 27064155
chr1 17231675 17231680 SP1 TRANSFAC yes 118239901
chr1 17231676 17231686 ELK1 JASPAR yes 27064156
chr1 17231676 17231686 ETV6 JASPAR yes 27064157
chr1 17231676 17231686 ELK1 JASPAR yes 118239902
chr1 17231676 17231686 ETV6 JASPAR yes 118239903
chr1 17231676 17231687 ELK4 JASPAR yes 27064158
chr1 17231676 17231687 ELK4 JASPAR yes 118239904
chr1 17231677 17231687 HINFP JASPAR yes 27064159
chr1 17231677 17231687 HINFP JASPAR yes 118239905
chr1 17231678 17231684 ETS1 JASPAR yes 27064160
chr1 17231678 17231684 SPI1 JASPAR yes 27064161
chr1 17231678 17231684 ETS1 JASPAR yes 118239906
chr1 17231678 17231684 SPI1 JASPAR yes 118239907
chr1 17231693 17231703 TEAD1 JASPAR yes 27064162
chr1 17231693 17231703 TEAD1 JASPAR yes 118239908
chr1 17231703 17231713 MAX JASPAR yes 27064163
chr1 17231703 17231713 MAX JASPAR yes 118239909
chr1 17231704 17231714 CLOCK JASPAR yes 27064164
chr1 17231704 17231714 CLOCK JASPAR yes 118239910
SNP sites on vista544[chr1:17231253-17231704]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 17231276 rs116382697 G C
E2F8 POLR2A
114619
chr1 17231300 rs541258547 G A
POLR2A
114620
chr1 17231303 rs561076332 G A
POLR2A RREB1
114621
chr1 17231320 rs112887597 A T
POLR2A RREB1 SMAD2
114622
chr1 17231362 rs11203380 C T
ETV6 POLR2A SP1 TFAP2A TFAP2B
114623
chr1 17231379 rs569676603 G A
POLR2A
114624
chr1 17231411 rs532095678 G A
ETS1 POLR2A SP1 SPI1 ZNF263
114625
chr1 17231492 rs112639241 G A
POLR2A
114626
chr1 17231505 rs534848015 C T
POLR2A YY2
114627
chr1 17231563 rs140058706 G A
POLR2A
114628
chr1 17231627 rs556582460 G C
LFA1 POLR2A
114629
chr1 17231655 rs576032342 G A
POLR2A
114630
chr1 17231685 rs544998458 T A,C
ELK1 ELK4 ETV6 HINFP POLR2A
114631
chr1 17231687 rs9435780 C T
ELK4 HINFP POLR2A
114632
chr1 17231692 rs11584240 G A,C
POLR2A
114633
chr1 17231701 rs563366333 G A
POLR2A TEAD1
114634
Genes possibly regulated by vista544[chr1:17231253-17231704]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 17300997 17307330 - MFAP2 ENSG00000117122.9 17307330 0.89 1.0 238 24374
Expression level of Genes
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miRNAs possibly regulated by vista544[chr1:17231253-17231704]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results