EnhancerDB
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  3. rs11203380[chr1:17231362]
Enhancers that have rs11203380[chr1:17231362]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
chr1 17231253 17231704 vista544
VISTA
Transcript factors that have rs11203380[chr1:17231362]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17230272 17232555 POLR2A UCSC Txn Factor no Conserved 107802244
chr1 17231353 17231363 ETV6 JASPAR yes 27064119
chr1 17231353 17231363 ETV6 JASPAR yes 118239865
chr1 17231357 17231370 TFAP2A JASPAR yes 27064120
chr1 17231357 17231370 TFAP2B JASPAR yes 27064121
chr1 17231357 17231370 TFAP2A JASPAR yes 118239866
chr1 17231357 17231370 TFAP2B JASPAR yes 118239867
chr1 17231359 17231365 SP1 TRANSFAC yes 27064122
chr1 17231359 17231365 SP1 TRANSFAC yes 118239868
Genes associated with rs11203380[chr1:17231362], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More