EnhancerDB
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  3. vista5463[chr1:229365571-229365974]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5463[chr1:229365571-229365974]
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Tissue distribution of vista5463
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Transcription factor that possibly regulate vista5463[chr1:229365571-229365974]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 229364845 229365947 POLR2A UCSC Txn Factor no Conserved 107877985
chr1 229365192 229365736 ZNF263 UCSC Txn Factor no Conserved 107877986
chr1 229365563 229365834 CEBPB UCSC Txn Factor no Conserved 107877999
chr1 229365601 229365928 NR3C1 UCSC Txn Factor no Conserved 107878002
chr1 229365580 229365590 SP1 JASPAR yes 35977585
chr1 229365580 229365590 SP1 JASPAR yes 118476118
chr1 229365580 229365601 ZNF263 JASPAR yes 35977586
chr1 229365580 229365601 ZNF263 JASPAR yes 118476119
chr1 229365584 229365595 E2F1 JASPAR yes 35977587
chr1 229365584 229365595 E2F1 JASPAR yes 118476120
chr1 229365585 229365590 SP1 TRANSFAC yes 35977588
chr1 229365585 229365590 SP1 TRANSFAC yes 118476121
chr1 229365629 229365634 TFAP2A TRANSFAC yes 35977589
chr1 229365629 229365634 TFAP2A TRANSFAC yes 118476122
chr1 229365629 229365635 MZF1 JASPAR yes 35977590
chr1 229365629 229365635 MZF1 JASPAR yes 118476123
chr1 229365637 229365643 NFIC JASPAR yes 35977591
chr1 229365637 229365643 NFIC JASPAR yes 118476124
chr1 229365655 229365668 ZBTB18 JASPAR yes 35977592
chr1 229365655 229365668 ZBTB18 JASPAR yes 118476125
chr1 229365676 229365693 RARA JASPAR yes 35977593
chr1 229365676 229365693 RARA JASPAR yes 118476126
chr1 229365683 229365696 NR2F1 JASPAR yes 35977594
chr1 229365683 229365696 NR2F1 JASPAR yes 118476127
chr1 229365687 229365699 TGIF1 JASPAR yes 35977595
chr1 229365687 229365699 TGIF1 JASPAR yes 118476128
chr1 229365687 229365701 RXRB JASPAR yes 35977596
chr1 229365687 229365701 RXRG JASPAR yes 35977597
chr1 229365687 229365701 RXRB JASPAR yes 118476129
chr1 229365687 229365701 RXRG JASPAR yes 118476130
chr1 229365687 229365702 NR2C2 JASPAR yes 35977598
chr1 229365687 229365702 NR2C2 JASPAR yes 118476131
chr1 229365710 229365721 CEBPA JASPAR yes 35977599
chr1 229365710 229365721 CEBPA JASPAR yes 118476132
chr1 229365710 229365722 HLF JASPAR yes 35977600
chr1 229365710 229365722 HLF JASPAR yes 118476133
chr1 229365711 229365722 CEBPB JASPAR yes 35977601
chr1 229365711 229365722 CEBPB JASPAR yes 118476134
chr1 229365715 229365730 SOX21 JASPAR yes 35977602
chr1 229365715 229365730 SOX21 JASPAR yes 118476135
chr1 229365716 229365727 ESRRA JASPAR yes 35977603
chr1 229365716 229365727 ESRRA JASPAR yes 118476136
chr1 229365717 229365732 NR2C2 JASPAR yes 35977604
chr1 229365717 229365732 NR2C2 JASPAR yes 118476137
chr1 229365720 229365724 LFA1 TRANSFAC yes 35977605
chr1 229365720 229365724 LFA1 TRANSFAC yes 118476138
chr1 229365736 229365742 NFIC JASPAR yes 35977606
chr1 229365736 229365742 NFIC JASPAR yes 118476139
chr1 229365765 229365780 AR JASPAR yes 35977607
chr1 229365765 229365780 AR JASPAR yes 118476140
chr1 229365765 229365782 NR3C2 JASPAR yes 35977608
chr1 229365765 229365782 NR3C2 JASPAR yes 118476141
chr1 229365776 229365785 SRY JASPAR yes 35977609
chr1 229365776 229365785 SRY JASPAR yes 118476142
chr1 229365778 229365781 MYB TRANSFAC yes 35977610
chr1 229365778 229365781 MYB TRANSFAC yes 118476143
chr1 229365780 229365786 SOX10 JASPAR yes 35977611
chr1 229365780 229365786 SOX10 JASPAR yes 118476144
chr1 229365782 229365797 HNF4G JASPAR yes 35977612
chr1 229365782 229365797 HNF4G JASPAR yes 118476145
chr1 229365787 229365793 SOX10 JASPAR yes 35977613
chr1 229365787 229365793 SOX10 JASPAR yes 118476146
chr1 229365798 229365803 ETS2 TRANSFAC yes 35977614
chr1 229365798 229365803 ETS2 TRANSFAC yes 118476147
chr1 229365798 229365806 EHF JASPAR yes 35977615
chr1 229365798 229365806 EHF JASPAR yes 118476148
chr1 229365802 229365807 ETS2 TRANSFAC yes 35977616
chr1 229365802 229365807 ETS2 TRANSFAC yes 118476149
chr1 229365814 229365835 REST JASPAR yes 35977617
chr1 229365814 229365835 REST JASPAR yes 118476150
chr1 229365824 229365845 MAFG JASPAR yes 35977618
chr1 229365824 229365845 MAFG JASPAR yes 118476151
chr1 229365856 229365874 TP63 JASPAR yes 35977619
chr1 229365856 229365874 TP63 JASPAR yes 118476152
chr1 229365875 229365879 YY1 TRANSFAC yes 35977620
chr1 229365875 229365879 YY1 TRANSFAC yes 118476153
chr1 229365891 229365912 REST JASPAR yes 35977621
chr1 229365891 229365912 REST JASPAR yes 118476154
chr1 229365901 229365905 NFE TRANSFAC yes 35977622
chr1 229365901 229365905 NFE TRANSFAC yes 118476155
chr1 229365901 229365908 MEIS1 JASPAR yes 35977623
chr1 229365901 229365908 MEIS1 JASPAR yes 118476156
chr1 229365941 229365945 H1TF2 TRANSFAC yes 35977624
chr1 229365941 229365945 NFE TRANSFAC yes 35977625
chr1 229365941 229365945 SRF TRANSFAC yes 35977626
chr1 229365941 229365945 H1TF2 TRANSFAC yes 118476157
chr1 229365941 229365945 NFE TRANSFAC yes 118476158
chr1 229365941 229365945 SRF TRANSFAC yes 118476159
SNP sites on vista5463[chr1:229365571-229365974]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 229365591 rs191333715 G A
CEBPB E2F1 POLR2A ZNF263
1009610
chr1 229365734 rs148220036 C T
CEBPB NR3C1 POLR2A ZNF263
1009611
chr1 229365801 rs553188845 G C
CEBPB EHF ETS2 NR3C1 POLR2A
1009612
chr1 229365858 rs74142354 A C
NR3C1 POLR2A TP63
1009613
chr1 229365872 rs185597208 G A
NR3C1 POLR2A TP63
1009614
Genes possibly regulated by vista5463[chr1:229365571-229365974]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 229385383 229387557 + TMEM78 ENSG00000177800.2 229385383 0.93 0.96 1928 80591
chr1 229406822 229441641 + RAB4A ENSG00000168118.7 229406822 0.61 1.0 1929 59152
chr1 229440129 229441248 + SPHAR ENSG00000213029.2 229440129 0.0 0.0 1930 25845
Expression level of Genes
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miRNAs possibly regulated by vista5463[chr1:229365571-229365974]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results