EnhancerDB
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Enhancers that have rs74142354[chr1:229365858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 229365571 229365974 vista5463
VISTA
Transcript factors that have rs74142354[chr1:229365858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229364845 229365947 POLR2A UCSC Txn Factor no Conserved 107877985
chr1 229365329 229365979 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390846
chr1 229365329 229365979 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877989
chr1 229365358 229365874 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390847
chr1 229365358 229365874 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877990
chr1 229365367 229365871 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390848
chr1 229365367 229365871 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877991
chr1 229365438 229365958 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877992
chr1 229365487 229365871 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390849
chr1 229365487 229365871 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877993
chr1 229365489 229365885 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390850
chr1 229365489 229365885 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877994
chr1 229365550 229365920 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390852
chr1 229365550 229365920 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877997
chr1 229365599 229365953 ZNF274 GTRD no Blood (GM12878) 107878000
chr1 229365601 229365928 NR3C1 UCSC Txn Factor no Conserved 107878002
chr1 229365605 229365919 ZNF274 GTRD no Bone Marrow (K562) 107878004
chr1 229365609 229365889 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878005
chr1 229365615 229365990 ZNF274 GTRD no Bone Marrow (K562) 107878007
chr1 229365644 229365928 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878009
chr1 229365654 229366137 ZNF143 GTRD no Epithelial (MCF-7) 21390855
chr1 229365654 229366137 ZNF143 GTRD no Epithelial (MCF-7) 107878010
chr1 229365856 229365874 TP63 JASPAR yes 35977619
chr1 229365856 229365874 TP63 JASPAR yes 118476152
Genes associated with rs74142354[chr1:229365858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More