EnhancerDB
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  3. vista5469[chr1:229527864-229528146]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5469[chr1:229527864-229528146]
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Tissue distribution of vista5469
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Transcription factor that possibly regulate vista5469[chr1:229527864-229528146]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 229527869 229527873 TEAD2 TRANSFAC yes 118476479
chr1 229527869 229527874 TBP TRANSFAC yes 118476480
chr1 229527877 229527882 GATA2 JASPAR yes 118476481
chr1 229527878 229527884 ZNF354C JASPAR yes 118476482
chr1 229527882 229527895 DUXA JASPAR yes 118476483
chr1 229527882 229527900 MAFF JASPAR yes 118476484
chr1 229527883 229527894 DUX4 JASPAR yes 118476485
chr1 229527883 229527898 MAFK JASPAR yes 118476486
chr1 229527887 229527903 POU4F2 JASPAR yes 118476487
chr1 229527887 229527903 POU4F3 JASPAR yes 118476488
chr1 229527890 229527900 BARHL2 JASPAR yes 118476489
chr1 229527892 229527896 YY1 TRANSFAC yes 118476490
chr1 229527893 229527908 MEF2C JASPAR yes 118476491
chr1 229527896 229527900 YY1 TRANSFAC yes 118476492
chr1 229527916 229527931 JUND JASPAR yes 118476493
chr1 229527927 229527931 YY1 TRANSFAC yes 118476494
chr1 229527929 229527938 SRY JASPAR yes 118476495
chr1 229527930 229527946 POU4F2 JASPAR yes 118476496
chr1 229527930 229527946 POU4F3 JASPAR yes 118476497
chr1 229527932 229527943 HOXA10 JASPAR yes 118476498
chr1 229527932 229527946 POU4F1 JASPAR yes 118476499
chr1 229527932 229527947 HNF1A JASPAR yes 118476500
chr1 229527933 229527943 GSX2 JASPAR yes 118476501
chr1 229527933 229527943 HOXB2 JASPAR yes 118476502
chr1 229527933 229527943 HOXB3 JASPAR yes 118476503
chr1 229527933 229527943 MNX1 JASPAR yes 118476504
chr1 229527933 229527943 POU6F1 JASPAR yes 118476505
chr1 229527933 229527946 HNF1B JASPAR yes 118476506
chr1 229527933 229527947 POU4F1 JASPAR yes 118476507
chr1 229527933 229527949 POU4F3 JASPAR yes 118476508
chr1 229527934 229527942 LMX1A JASPAR yes 118476509
chr1 229527934 229527942 LMX1B JASPAR yes 118476510
chr1 229527934 229527942 NKX6-1 JASPAR yes 118476511
chr1 229527934 229527942 NKX6-2 JASPAR yes 118476512
chr1 229527934 229527942 VAX1 JASPAR yes 118476513
chr1 229527934 229527942 VAX2 JASPAR yes 118476514
chr1 229527934 229527942 VSX1 JASPAR yes 118476515
chr1 229527934 229527942 VSX2 JASPAR yes 118476516
chr1 229527937 229527949 POU2F1 JASPAR yes 118476517
chr1 229527937 229527950 POU3F3 JASPAR yes 118476518
chr1 229527938 229527950 POU3F1 JASPAR yes 118476519
chr1 229527944 229527955 FOXB1 JASPAR yes 118476520
chr1 229527944 229527955 FOXC1 JASPAR yes 118476521
chr1 229527945 229527949 YY1 TRANSFAC yes 118476522
chr1 229527956 229527966 NFATC3 JASPAR yes 118476523
chr1 229527958 229527965 NFATC2 JASPAR yes 118476524
chr1 229527964 229527977 POU3F3 JASPAR yes 118476525
chr1 229527971 229527975 YY1 TRANSFAC yes 118476526
chr1 229527976 229527982 HiNF-A TRANSFAC yes 118476527
chr1 229528003 229528008 H4TF1 TRANSFAC yes 118476528
chr1 229528008 229528017 SOX9 JASPAR yes 118476529
chr1 229528008 229528029 IRF1 JASPAR yes 118476530
chr1 229528009 229528024 FOXP1 JASPAR yes 118476531
chr1 229528010 229528019 SRY JASPAR yes 118476532
chr1 229528030 229528034 YY1 TRANSFAC yes 118476533
chr1 229528030 229528044 SPIC JASPAR yes 118476534
chr1 229528038 229528042 YY1 TRANSFAC yes 118476535
chr1 229528051 229528057 HiNF-A TRANSFAC yes 118476536
chr1 229528058 229528062 YY1 TRANSFAC yes 118476537
chr1 229528060 229528067 NKX3-1 JASPAR yes 118476538
chr1 229528087 229528093 SOX10 JASPAR yes 118476539
chr1 229528095 229528116 ZNF263 JASPAR yes 118476540
chr1 229528096 229528117 ZNF263 JASPAR yes 118476541
chr1 229528099 229528120 ZNF263 JASPAR yes 118476542
chr1 229528100 229528115 PRDM1 JASPAR yes 118476543
chr1 229528100 229528121 ZNF263 JASPAR yes 118476544
chr1 229528108 229528116 EHF JASPAR yes 118476545
chr1 229528110 229528115 ETS2 TRANSFAC yes 118476546
chr1 229528114 229528124 MZF1 JASPAR yes 118476547
chr1 229528124 229528128 NFE TRANSFAC yes 118476548
chr1 229528124 229528137 SMAD2 JASPAR yes 118476549
chr1 229528124 229528145 ZNF263 JASPAR yes 118476550
SNP sites on vista5469[chr1:229527864-229528146]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 229527941 rs16841388 A G
GSX2 HNF1A HNF1B HOXA10 HOXB2 HOXB3 LMX1A LMX1B MNX1 NKX6-1 NKX6-2 POU2F1 POU3F1 POU3F3 POU4F1 POU4F2 POU4F3 POU6F1 VAX1 VAX2 VSX1 VSX2
1010557
chr1 229527958 rs566579349 CT C
NFATC2 NFATC3
1010558
chr1 229527961 rs557436441 G GA
NFATC2 NFATC3
1010559
chr1 229528071 rs558850845 CAAAT C no 1010560
chr1 229528098 rs570907341 C T
ZNF263
1010561
Genes possibly regulated by vista5469[chr1:229527864-229528146]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 229440129 229441248 + SPHAR ENSG00000213029.2 229440129 0.0 0.0 1930 12265
chr1 229456758 229479041 - CCSAP ENSG00000154429.6 229479041 0.85 0.99 1931 51177
chr1 229566992 229569845 - ACTA1 ENSG00000143632.10 229569845 1.0 0.94 1932 58301
Expression level of Genes
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miRNAs possibly regulated by vista5469[chr1:229527864-229528146]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results