EnhancerDB
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  3. rs16841388[chr1:229527941]
Enhancers that have rs16841388[chr1:229527941]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229527864 229528146 vista5469
VISTA
Transcript factors that have rs16841388[chr1:229527941]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229527930 229527946 POU4F2 JASPAR yes 118476496
chr1 229527930 229527946 POU4F3 JASPAR yes 118476497
chr1 229527932 229527943 HOXA10 JASPAR yes 118476498
chr1 229527932 229527946 POU4F1 JASPAR yes 118476499
chr1 229527932 229527947 HNF1A JASPAR yes 118476500
chr1 229527933 229527943 GSX2 JASPAR yes 118476501
chr1 229527933 229527943 HOXB2 JASPAR yes 118476502
chr1 229527933 229527943 HOXB3 JASPAR yes 118476503
chr1 229527933 229527943 MNX1 JASPAR yes 118476504
chr1 229527933 229527943 POU6F1 JASPAR yes 118476505
chr1 229527933 229527946 HNF1B JASPAR yes 118476506
chr1 229527933 229527947 POU4F1 JASPAR yes 118476507
chr1 229527933 229527949 POU4F3 JASPAR yes 118476508
chr1 229527934 229527942 LMX1A JASPAR yes 118476509
chr1 229527934 229527942 LMX1B JASPAR yes 118476510
chr1 229527934 229527942 NKX6-1 JASPAR yes 118476511
chr1 229527934 229527942 NKX6-2 JASPAR yes 118476512
chr1 229527934 229527942 VAX1 JASPAR yes 118476513
chr1 229527934 229527942 VAX2 JASPAR yes 118476514
chr1 229527934 229527942 VSX1 JASPAR yes 118476515
chr1 229527934 229527942 VSX2 JASPAR yes 118476516
chr1 229527937 229527949 POU2F1 JASPAR yes 118476517
chr1 229527937 229527950 POU3F3 JASPAR yes 118476518
chr1 229527938 229527950 POU3F1 JASPAR yes 118476519
Genes associated with rs16841388[chr1:229527941], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More