EnhancerDB
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  3. vista5470[chr1:229544503-229544714]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5470[chr1:229544503-229544714]
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Tissue distribution of vista5470
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Transcription factor that possibly regulate vista5470[chr1:229544503-229544714]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 229544070 229544813 REST UCSC Txn Factor no Conserved 107878137
chr1 229544489 229544509 TP63 JASPAR yes 35986962
chr1 229544489 229544509 TP63 JASPAR yes 118476551
chr1 229544517 229544532 ZIC3 JASPAR yes 35986965
chr1 229544517 229544532 ZIC4 JASPAR yes 35986966
chr1 229544517 229544532 ZIC3 JASPAR yes 118476552
chr1 229544517 229544532 ZIC4 JASPAR yes 118476553
chr1 229544518 229544532 ZIC1 JASPAR yes 35986967
chr1 229544518 229544532 ZIC1 JASPAR yes 118476554
chr1 229544533 229544537 H4TF2 TRANSFAC yes 35986968
chr1 229544533 229544537 H4TF2 TRANSFAC yes 118476555
chr1 229544538 229544553 TFAP2A JASPAR yes 35986969
chr1 229544538 229544553 TFAP2C JASPAR yes 35986970
chr1 229544538 229544553 TFAP2A JASPAR yes 118476556
chr1 229544538 229544553 TFAP2C JASPAR yes 118476557
chr1 229544541 229544552 TFAP2A JASPAR yes 35986971
chr1 229544541 229544552 TFAP2B JASPAR yes 35986972
chr1 229544541 229544552 TFAP2A JASPAR yes 118476558
chr1 229544541 229544552 TFAP2B JASPAR yes 118476559
chr1 229544561 229544565 LFA1 TRANSFAC yes 35986973
chr1 229544561 229544565 LFA1 TRANSFAC yes 118476560
chr1 229544562 229544578 NFYA JASPAR yes 35986974
chr1 229544562 229544578 NFYA JASPAR yes 118476561
chr1 229544567 229544571 H1TF2 TRANSFAC yes 35986975
chr1 229544567 229544571 NFE TRANSFAC yes 35986976
chr1 229544567 229544571 SRF TRANSFAC yes 35986977
chr1 229544567 229544571 H1TF2 TRANSFAC yes 118476562
chr1 229544567 229544571 NFE TRANSFAC yes 118476563
chr1 229544567 229544571 SRF TRANSFAC yes 118476564
chr1 229544567 229544573 NFYC TRANSFAC yes 35986978
chr1 229544567 229544573 NFYC TRANSFAC yes 118476565
chr1 229544601 229544612 STAT3 JASPAR yes 35986979
chr1 229544601 229544612 STAT3 JASPAR yes 118476566
chr1 229544616 229544626 TFEB JASPAR yes 35986980
chr1 229544616 229544626 TFEB JASPAR yes 118476567
chr1 229544616 229544627 USF1 JASPAR yes 35986981
chr1 229544616 229544627 USF2 JASPAR yes 35986982
chr1 229544616 229544627 USF1 JASPAR yes 118476568
chr1 229544616 229544627 USF2 JASPAR yes 118476569
chr1 229544625 229544635 TFAP4 JASPAR yes 35986983
chr1 229544625 229544635 TFAP4 JASPAR yes 118476570
chr1 229544629 229544637 MEIS2 JASPAR yes 35986984
chr1 229544629 229544637 MEIS3 JASPAR yes 35986985
chr1 229544629 229544637 MEIS2 JASPAR yes 118476571
chr1 229544629 229544637 MEIS3 JASPAR yes 118476572
chr1 229544630 229544634 NFE TRANSFAC yes 35986986
chr1 229544630 229544634 NFE TRANSFAC yes 118476573
chr1 229544634 229544652 ESR1 JASPAR yes 35986987
chr1 229544634 229544652 ESR1 JASPAR yes 118476574
chr1 229544646 229544659 TFAP2A JASPAR yes 35986988
chr1 229544646 229544659 TFAP2C JASPAR yes 35986989
chr1 229544646 229544659 TFAP2A JASPAR yes 118476575
chr1 229544646 229544659 TFAP2C JASPAR yes 118476576
chr1 229544646 229544660 EBF1 JASPAR yes 35986990
chr1 229544646 229544660 EBF1 JASPAR yes 118476577
chr1 229544647 229544658 EBF1 JASPAR yes 35986991
chr1 229544647 229544658 EBF1 JASPAR yes 118476578
chr1 229544658 229544678 ESR1 JASPAR yes 35986992
chr1 229544658 229544678 ESR1 JASPAR yes 118476579
chr1 229544669 229544684 TFAP2A JASPAR yes 35986993
chr1 229544669 229544684 TFAP2C JASPAR yes 35986994
chr1 229544669 229544684 TFAP2A JASPAR yes 118476580
chr1 229544669 229544684 TFAP2C JASPAR yes 118476581
chr1 229544672 229544683 TFAP2A JASPAR yes 35986995
chr1 229544672 229544683 TFAP2B JASPAR yes 35986996
chr1 229544672 229544683 TFAP2C JASPAR yes 35986997
chr1 229544672 229544683 TFAP2A JASPAR yes 118476582
chr1 229544672 229544683 TFAP2B JASPAR yes 118476583
chr1 229544672 229544683 TFAP2C JASPAR yes 118476584
chr1 229544682 229544703 ZNF263 JASPAR yes 35986998
chr1 229544682 229544703 ZNF263 JASPAR yes 118476585
chr1 229544685 229544706 ZNF263 JASPAR yes 35986999
chr1 229544685 229544706 ZNF263 JASPAR yes 118476586
chr1 229544699 229544710 FLI1 JASPAR yes 35987000
chr1 229544699 229544710 FLI1 JASPAR yes 118476587
chr1 229544701 229544709 EHF JASPAR yes 35987001
chr1 229544701 229544709 EHF JASPAR yes 118476588
chr1 229544702 229544723 REST JASPAR yes 35987002
chr1 229544702 229544723 REST JASPAR yes 118476589
chr1 229544703 229544722 REST JASPAR yes 35987003
chr1 229544703 229544722 REST JASPAR yes 118476590
chr1 229544706 229544710 NFE TRANSFAC yes 35987004
chr1 229544706 229544710 NFE TRANSFAC yes 118476591
SNP sites on vista5470[chr1:229544503-229544714]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 229544600 rs146424428 C T
REST
1010603
chr1 229544680 rs56097484 G A
REST TFAP2A TFAP2B TFAP2C
1010604
Genes possibly regulated by vista5470[chr1:229544503-229544714]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 229456758 229479041 - CCSAP ENSG00000154429.6 229479041 0.85 0.99 1931 34538
chr1 229566992 229569845 - ACTA1 ENSG00000143632.10 229569845 1.0 0.94 1932 74869
chr1 229577045 229644103 - NUP133 ENSG00000069248.9 229644103 0.58 0.99 1933 611
Expression level of Genes
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miRNAs possibly regulated by vista5470[chr1:229544503-229544714]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results