Enhancers that have rs56097484[chr1:229544680]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229540746 229550075 enh12766
chr1 229544503 229544714 vista5470

Transcript factors that have rs56097484[chr1:229544680]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229544070 229544813 REST UCSC Txn Factor no Conserved 107878137
chr1 229544407 229544807 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21390949
chr1 229544407 229544807 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878138
chr1 229544422 229545111 ZNF274 GTRD no Bone Marrow (K562) 107878139
chr1 229544444 229544950 ZNF274 GTRD no Blood (GM12878) 107878140
chr1 229544534 229545093 ZNF274 GTRD no Bone Marrow (K562) 107878141
chr1 229544609 229544958 ZNF274 GTRD no Blood (GM12878) 107878142
chr1 229544628 229545065 ZNF274 GTRD no Bone Marrow (K562) 107878143
chr1 229544648 229545070 ZNF274 GTRD no Bone Marrow (K562) 107878144
chr1 229544666 229544970 ZNF274 GTRD no Blood (GM12878) 107878145
chr1 229544669 229544684 TFAP2A JASPAR yes 35986993
chr1 229544669 229544684 TFAP2C JASPAR yes 35986994
chr1 229544669 229544684 TFAP2A JASPAR yes 118476580
chr1 229544669 229544684 TFAP2C JASPAR yes 118476581
chr1 229544672 229544683 TFAP2A JASPAR yes 35986995
chr1 229544672 229544683 TFAP2B JASPAR yes 35986996
chr1 229544672 229544683 TFAP2C JASPAR yes 35986997
chr1 229544672 229544683 TFAP2A JASPAR yes 118476582
chr1 229544672 229544683 TFAP2B JASPAR yes 118476583
chr1 229544672 229544683 TFAP2C JASPAR yes 118476584

Genes associated with rs56097484[chr1:229544680], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More