EnhancerDB
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  3. vista5486[chr1:230212552-230213069]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5486[chr1:230212552-230213069]
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Tissue distribution of vista5486
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Transcription factor that possibly regulate vista5486[chr1:230212552-230213069]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 230212551 230212556 GATA2 JASPAR yes 36018708
chr1 230212551 230212556 GATA2 JASPAR yes 118477284
chr1 230212556 230212569 ZBTB18 JASPAR yes 36018709
chr1 230212556 230212569 ZBTB18 JASPAR yes 118477285
chr1 230212565 230212581 SOX4 JASPAR yes 36018710
chr1 230212565 230212581 SOX4 JASPAR yes 118477286
chr1 230212566 230212579 POU2F2 JASPAR yes 36018711
chr1 230212566 230212579 POU2F2 JASPAR yes 118477287
chr1 230212568 230212572 YY1 TRANSFAC yes 36018712
chr1 230212568 230212572 YY1 TRANSFAC yes 118477288
chr1 230212569 230212578 POU5F1B JASPAR yes 36018713
chr1 230212569 230212578 POU5F1B JASPAR yes 118477289
chr1 230212573 230212584 YY2 JASPAR yes 36018714
chr1 230212573 230212584 YY2 JASPAR yes 118477290
chr1 230212573 230212587 E2F7 JASPAR yes 36018715
chr1 230212573 230212587 E2F7 JASPAR yes 118477291
chr1 230212575 230212586 E2F1 JASPAR yes 36018716
chr1 230212575 230212586 E2F1 JASPAR yes 118477292
chr1 230212576 230212587 E2F4 JASPAR yes 36018717
chr1 230212576 230212587 E2F6 JASPAR yes 36018718
chr1 230212576 230212587 E2F4 JASPAR yes 118477293
chr1 230212576 230212587 E2F6 JASPAR yes 118477294
chr1 230212577 230212582 SP1 TRANSFAC yes 36018719
chr1 230212577 230212582 SP1 TRANSFAC yes 118477295
chr1 230212578 230212586 E2F1 JASPAR yes 36018720
chr1 230212578 230212586 E2F1 JASPAR yes 118477296
chr1 230212625 230212631 YY1 JASPAR yes 36018721
chr1 230212625 230212631 YY1 JASPAR yes 118477297
chr1 230212639 230212646 SPIB JASPAR yes 36018722
chr1 230212639 230212646 SPIB JASPAR yes 118477298
chr1 230212647 230212653 ATF1 TRANSFAC yes 36018723
chr1 230212647 230212653 ATF1 TRANSFAC yes 118477299
chr1 230212715 230212724 NKX2-8 JASPAR yes 36018724
chr1 230212715 230212724 NKX2-8 JASPAR yes 118477300
chr1 230212795 230212815 TP53 JASPAR yes 36018725
chr1 230212795 230212815 TP53 JASPAR yes 118477301
chr1 230212804 230212820 POU4F3 JASPAR yes 36018726
chr1 230212804 230212820 POU4F3 JASPAR yes 118477302
chr1 230212806 230212820 POU4F1 JASPAR yes 36018727
chr1 230212806 230212820 POU4F1 JASPAR yes 118477303
chr1 230212813 230212820 NKX3-1 JASPAR yes 36018728
chr1 230212813 230212820 NKX3-1 JASPAR yes 118477304
chr1 230212818 230212832 GATA2 JASPAR yes 36018729
chr1 230212818 230212832 GATA2 JASPAR yes 118477305
chr1 230212831 230212835 YY1 TRANSFAC yes 36018730
chr1 230212831 230212835 YY1 TRANSFAC yes 118477306
chr1 230212863 230212867 LFA1 TRANSFAC yes 36018731
chr1 230212863 230212867 LFA1 TRANSFAC yes 118477307
chr1 230212866 230212870 YY1 TRANSFAC yes 36018732
chr1 230212866 230212870 YY1 TRANSFAC yes 118477308
chr1 230212877 230212881 NFE TRANSFAC yes 36018733
chr1 230212877 230212881 NFE TRANSFAC yes 118477309
chr1 230212901 230212918 ZNF410 JASPAR yes 36018734
chr1 230212901 230212918 ZNF410 JASPAR yes 118477310
chr1 230212926 230212935 SOX9 JASPAR yes 36018735
chr1 230212926 230212935 SOX9 JASPAR yes 118477311
chr1 230212928 230212937 SRY JASPAR yes 36018736
chr1 230212928 230212937 SRY JASPAR yes 118477312
chr1 230212944 230212957 TFAP2A JASPAR yes 36018737
chr1 230212944 230212957 TFAP2B JASPAR yes 36018738
chr1 230212944 230212957 TFAP2C JASPAR yes 36018739
chr1 230212944 230212957 TFAP2A JASPAR yes 118477313
chr1 230212944 230212957 TFAP2B JASPAR yes 118477314
chr1 230212944 230212957 TFAP2C JASPAR yes 118477315
chr1 230212950 230212963 NFKB1 JASPAR yes 36018740
chr1 230212950 230212963 NFKB2 JASPAR yes 36018741
chr1 230212950 230212963 NFKB1 JASPAR yes 118477316
chr1 230212950 230212963 NFKB2 JASPAR yes 118477317
chr1 230212951 230212961 NFKB1 JASPAR yes 36018742
chr1 230212951 230212961 RELA JASPAR yes 36018743
chr1 230212951 230212961 REL JASPAR yes 36018744
chr1 230212951 230212961 NFKB1 JASPAR yes 118477318
chr1 230212951 230212961 RELA JASPAR yes 118477319
chr1 230212951 230212961 REL JASPAR yes 118477320
chr1 230212951 230212962 NFKB1 JASPAR yes 36018745
chr1 230212951 230212962 NFKB1 JASPAR yes 118477321
chr1 230212952 230212963 NFKB1 JASPAR yes 36018746
chr1 230212952 230212963 NFKB1 JASPAR yes 118477322
chr1 230212957 230212971 RXRB JASPAR yes 36018747
chr1 230212957 230212971 RXRB JASPAR yes 118477323
chr1 230212957 230212972 NR2C2 JASPAR yes 36018748
chr1 230212957 230212972 NR2C2 JASPAR yes 118477324
chr1 230212960 230212973 NR2F1 JASPAR yes 36018749
chr1 230212960 230212973 NR2F1 JASPAR yes 118477325
chr1 230212962 230212973 ESRRB JASPAR yes 36018750
chr1 230212962 230212973 ESRRB JASPAR yes 118477326
chr1 230212963 230212977 RORA JASPAR yes 36018751
chr1 230212963 230212977 RORA JASPAR yes 118477327
chr1 230212964 230212974 RORA JASPAR yes 36018752
chr1 230212964 230212974 RORA JASPAR yes 118477328
chr1 230212989 230213000 ESRRA JASPAR yes 36018753
chr1 230212989 230213000 ESRRB JASPAR yes 36018754
chr1 230212989 230213000 ESRRA JASPAR yes 118477329
chr1 230212989 230213000 ESRRB JASPAR yes 118477330
chr1 230212990 230212998 NR4A2 JASPAR yes 36018755
chr1 230212990 230212998 NR4A2 JASPAR yes 118477331
chr1 230212991 230213001 RORA JASPAR yes 36018756
chr1 230212991 230213001 RORA JASPAR yes 118477332
chr1 230212991 230213008 RARA JASPAR yes 36018757
chr1 230212991 230213008 RARA JASPAR yes 118477333
chr1 230213007 230213028 ZNF263 JASPAR yes 36018758
chr1 230213007 230213028 ZNF263 JASPAR yes 118477334
chr1 230213019 230213040 ZNF263 JASPAR yes 36018759
chr1 230213019 230213040 ZNF263 JASPAR yes 118477335
chr1 230213020 230213041 ZNF263 JASPAR yes 36018760
chr1 230213020 230213041 ZNF263 JASPAR yes 118477336
chr1 230213021 230213031 SP1 JASPAR yes 36018761
chr1 230213021 230213031 SP1 JASPAR yes 118477337
chr1 230213024 230213034 MZF1 JASPAR yes 36018762
chr1 230213024 230213034 MZF1 JASPAR yes 118477338
chr1 230213027 230213033 SP1 TRANSFAC yes 36018763
chr1 230213027 230213033 SP1 TRANSFAC yes 118477339
chr1 230213032 230213043 ESRRA JASPAR yes 36018764
chr1 230213032 230213043 ESRRA JASPAR yes 118477340
chr1 230213034 230213051 RARA JASPAR yes 36018765
chr1 230213034 230213051 RXRA JASPAR yes 36018766
chr1 230213034 230213051 RARA JASPAR yes 118477341
chr1 230213034 230213051 RXRA JASPAR yes 118477342
chr1 230213044 230213050 NFE2 TRANSFAC yes 36018767
chr1 230213044 230213050 NFE2 TRANSFAC yes 118477343
chr1 230213047 230213057 SP1 JASPAR yes 36018768
chr1 230213047 230213057 SP1 JASPAR yes 118477344
SNP sites on vista5486[chr1:230212552-230213069]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 230212568 rs188351965 G A
POU2F2 SOX4 YY1 ZBTB18
1014448
chr1 230212576 rs112511909 A G
E2F1 E2F4 E2F6 E2F7 POU2F2 POU5F1B SOX4 YY2
1014449
chr1 230212581 rs13376257 G A
E2F1 E2F4 E2F6 E2F7 SOX4 SP1 YY2
1014450
chr1 230212663 rs80343667 T C no 1014451
chr1 230212750 rs76027333 G A no 1014452
chr1 230212770 rs143268433 G A no 1014453
chr1 230212773 rs184936003 G A no 1014454
chr1 230212991 rs76607586 G C
ESRRA ESRRB NR4A2 RARA RORA
1014455
chr1 230213009 rs572201353 G C
ZNF263
1014456
chr1 230213017 rs60498942 G A
ZNF263
1014457
chr1 230213059 rs543539754 G A no 1014458
Genes possibly regulated by vista5486[chr1:230212552-230213069]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 230193536 230417870 + GALNT2 ENSG00000143641.8 230193536 0.77 0.99 1937 80984
Expression level of Genes
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miRNAs possibly regulated by vista5486[chr1:230212552-230213069]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results