EnhancerDB
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  3. rs543539754[chr1:230213059]
Enhancers that have rs543539754[chr1:230213059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr1 230212552 230213069 vista5486
VISTA
Transcript factors that have rs543539754[chr1:230213059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230211239 230213783 ZNF274 GTRD no Blood (GM12878) 107878312
chr1 230211518 230213864 ZNF274 GTRD no Blood (GM12878) 107878313
chr1 230211671 230213357 ZNF274 GTRD no Blood (GM12878) 107878314
chr1 230211713 230213752 ZNF274 GTRD no Blood (GM12878) 107878315
chr1 230211719 230213781 ZNF274 GTRD no Blood (GM12878) 107878316
chr1 230211773 230213273 ZNF274 GTRD no Blood (GM12878) 107878317
chr1 230211789 230213606 ZNF274 GTRD no Blood (GM12878) 107878318
chr1 230211796 230213172 ZNF274 GTRD no Blood (GM12878) 107878319
chr1 230211801 230213790 ZNF274 GTRD no Blood (GM12878) 107878320
chr1 230211879 230213938 ZNF274 GTRD no Blood (GM12878) 107878321
chr1 230212090 230213502 ZNF274 GTRD no Blood (GM12878) 107878323
chr1 230212106 230213135 ZNF274 GTRD no Blood (GM12878) 107878324
chr1 230212202 230213647 ZNF274 GTRD no Blood (GM12878) 107878325
chr1 230212210 230213256 ZNF274 GTRD no Blood (GM12878) 107878327
chr1 230212261 230213205 ZNF274 GTRD no Blood (GM12878) 107878333
chr1 230212282 230213615 ZNF274 GTRD no Blood (GM12878) 107878334
chr1 230212289 230213379 ZNF274 GTRD no Blood (GM12878) 107878336
chr1 230212289 230213407 ZNF274 GTRD no Blood (GM12878) 107878337
chr1 230212292 230213172 ZNF274 GTRD no Blood (GM12878) 107878338
chr1 230212312 230213211 ZNF274 GTRD no Blood (GM12878) 107878339
chr1 230212313 230213343 ZNF274 GTRD no Blood (GM12878) 107878340
chr1 230212324 230213326 ZNF274 GTRD no Blood (GM12878) 107878342
chr1 230212466 230213162 ZNF274 GTRD no Blood (GM12878) 107878350
chr1 230212495 230213132 ZNF274 GTRD no Blood (GM12878) 107878352
Genes associated with rs543539754[chr1:230213059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More