EnhancerDB
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  3. vista54899[chr7:2838950-2839257]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54899[chr7:2838950-2839257]
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Tissue distribution of vista54899
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Transcription factor that possibly regulate vista54899[chr7:2838950-2839257]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 2839032 2839636 GATA1 UCSC Txn Factor no Conserved 108543068
chr7 2838967 2838973 SOX10 JASPAR yes 12559311
chr7 2838967 2838973 SOX10 JASPAR yes 26016946
chr7 2838997 2839002 SP1 TRANSFAC yes 12559312
chr7 2838997 2839002 SP1 TRANSFAC yes 26016947
chr7 2838997 2839015 RARA JASPAR yes 12559313
chr7 2838997 2839015 RARA JASPAR yes 26016948
chr7 2839022 2839026 LFA1 TRANSFAC yes 12559314
chr7 2839022 2839026 LFA1 TRANSFAC yes 26016949
chr7 2839073 2839091 TP73 JASPAR yes 12559315
chr7 2839073 2839091 TP73 JASPAR yes 26016950
chr7 2839125 2839131 GATA3 JASPAR yes 12559316
chr7 2839125 2839131 GATA3 JASPAR yes 26016951
chr7 2839144 2839155 RUNX1 JASPAR yes 12559317
chr7 2839144 2839155 RUNX1 JASPAR yes 26016952
chr7 2839146 2839166 PPARG JASPAR yes 12559318
chr7 2839146 2839166 PPARG JASPAR yes 26016953
chr7 2839148 2839165 ESR1 JASPAR yes 12559319
chr7 2839148 2839165 ESR1 JASPAR yes 26016954
chr7 2839148 2839166 ESR2 JASPAR yes 12559320
chr7 2839148 2839166 ESR2 JASPAR yes 26016955
chr7 2839149 2839169 ESR1 JASPAR yes 12559321
chr7 2839149 2839169 ESR1 JASPAR yes 26016956
chr7 2839159 2839175 SOX4 JASPAR yes 12559322
chr7 2839159 2839175 SOX4 JASPAR yes 26016957
chr7 2839192 2839203 NFE2L2 JASPAR yes 12559323
chr7 2839192 2839203 NFE2L2 JASPAR yes 26016958
chr7 2839239 2839254 FOXP1 JASPAR yes 12559324
chr7 2839239 2839254 FOXP1 JASPAR yes 26016959
chr7 2839240 2839251 FOXA1 JASPAR yes 12559325
chr7 2839240 2839251 FOXA1 JASPAR yes 26016960
chr7 2839240 2839255 FOXA1 JASPAR yes 12559326
chr7 2839240 2839255 FOXA1 JASPAR yes 26016961
chr7 2839241 2839252 FOXC1 JASPAR yes 12559327
chr7 2839241 2839252 FOXC1 JASPAR yes 26016962
chr7 2839241 2839253 FOXC2 JASPAR yes 12559328
chr7 2839241 2839253 FOXC2 JASPAR yes 26016963
SNP sites on vista54899[chr7:2838950-2839257]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 2839012 rs114292080 G A
RARA
9586265
chr7 2839116 rs539547572 T A
GATA1
9586266
chr7 2839136 rs116444593 A G
GATA1
9586267
chr7 2839254 rs112433606 T C,G
FOXA1 FOXP1 GATA1
9586268
Genes possibly regulated by vista54899[chr7:2838950-2839257]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 2767746 2883958 - GNA12 ENSG00000146535.9 2883958 0.67 1.0 7181 55299
Expression level of Genes
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miRNAs possibly regulated by vista54899[chr7:2838950-2839257]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results