EnhancerDB
  1. Home
  2. SNP
  3. rs539547572[chr7:2839116]
Enhancers that have rs539547572[chr7:2839116]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 2838125 2881021 enh23934
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr7 2838950 2839257 vista54899
VISTA
Transcript factors that have rs539547572[chr7:2839116]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 2839032 2839636 GATA1 UCSC Txn Factor no Conserved 108543068
Genes associated with rs539547572[chr7:2839116], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More