EnhancerDB
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  3. vista54900[chr7:2842322-2842519]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54900[chr7:2842322-2842519]
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Tissue distribution of vista54900
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Transcription factor that possibly regulate vista54900[chr7:2842322-2842519]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 2842230 2842574 NFIC UCSC Txn Factor no Conserved 108543069
chr7 2842240 2842548 FOXA1 UCSC Txn Factor no Conserved 108543070
chr7 2842267 2842525 FOXA2 UCSC Txn Factor no Conserved 108543071
chr7 2842270 2842515 EP300 UCSC Txn Factor no Conserved 108543072
chr7 2842313 2842328 FOXP1 JASPAR yes 12559703
chr7 2842313 2842328 FOXP1 JASPAR yes 26016964
chr7 2842340 2842355 FOXA1 JASPAR yes 12559704
chr7 2842340 2842355 FOXA1 JASPAR yes 26016965
chr7 2842342 2842354 FOXC2 JASPAR yes 12559705
chr7 2842342 2842354 FOXC2 JASPAR yes 26016966
chr7 2842344 2842355 FOXA1 JASPAR yes 12559706
chr7 2842344 2842355 FOXA1 JASPAR yes 26016967
chr7 2842348 2842360 TFAP2C JASPAR yes 12559707
chr7 2842348 2842360 TFAP2C JASPAR yes 26016968
chr7 2842353 2842367 TLX1 JASPAR yes 12559708
chr7 2842353 2842367 TLX1 JASPAR yes 26016969
chr7 2842362 2842374 FOXI1 JASPAR yes 12559709
chr7 2842362 2842374 FOXI1 JASPAR yes 26016970
chr7 2842386 2842401 FOXP1 JASPAR yes 12559710
chr7 2842386 2842401 FOXP1 JASPAR yes 26016971
chr7 2842387 2842398 FOXA1 JASPAR yes 12559711
chr7 2842387 2842398 FOXA1 JASPAR yes 26016972
chr7 2842387 2842402 FOXA1 JASPAR yes 12559712
chr7 2842387 2842402 FOXA1 JASPAR yes 26016973
chr7 2842388 2842399 FOXB1 JASPAR yes 12559713
chr7 2842388 2842399 FOXB1 JASPAR yes 26016974
chr7 2842389 2842400 FOXP2 JASPAR yes 12559714
chr7 2842389 2842400 FOXP2 JASPAR yes 26016975
chr7 2842390 2842398 FOXO3 JASPAR yes 12559715
chr7 2842390 2842398 FOXO3 JASPAR yes 26016976
chr7 2842391 2842398 FOXD2 JASPAR yes 12559716
chr7 2842391 2842398 FOXI1 JASPAR yes 12559717
chr7 2842391 2842398 FOXL1 JASPAR yes 12559718
chr7 2842391 2842398 FOXO4 JASPAR yes 12559719
chr7 2842391 2842398 FOXO6 JASPAR yes 12559720
chr7 2842391 2842398 FOXP3 JASPAR yes 12559721
chr7 2842391 2842398 FOXD2 JASPAR yes 26016977
chr7 2842391 2842398 FOXI1 JASPAR yes 26016978
chr7 2842391 2842398 FOXL1 JASPAR yes 26016979
chr7 2842391 2842398 FOXO4 JASPAR yes 26016980
chr7 2842391 2842398 FOXO6 JASPAR yes 26016981
chr7 2842391 2842398 FOXP3 JASPAR yes 26016982
chr7 2842391 2842399 FOXD1 JASPAR yes 12559722
chr7 2842391 2842399 FOXO3 JASPAR yes 12559723
chr7 2842391 2842399 FOXD1 JASPAR yes 26016983
chr7 2842391 2842399 FOXO3 JASPAR yes 26016984
chr7 2842392 2842408 ZNF143 JASPAR yes 12559724
chr7 2842392 2842408 ZNF143 JASPAR yes 26016985
chr7 2842394 2842405 SPDEF JASPAR yes 12559725
chr7 2842394 2842405 SPDEF JASPAR yes 26016986
chr7 2842403 2842407 YY1 TRANSFAC yes 12559726
chr7 2842403 2842407 YY1 TRANSFAC yes 26016987
chr7 2842404 2842419 FOXP1 JASPAR yes 12559727
chr7 2842404 2842419 FOXP1 JASPAR yes 26016988
chr7 2842431 2842437 SOX10 JASPAR yes 12559728
chr7 2842431 2842437 SOX10 JASPAR yes 26016989
chr7 2842451 2842458 SPIB JASPAR yes 12559729
chr7 2842451 2842458 SPIB JASPAR yes 26016990
chr7 2842464 2842473 NKX2-8 JASPAR yes 12559730
chr7 2842464 2842473 NKX2-8 JASPAR yes 26016991
chr7 2842483 2842498 HNF4G JASPAR yes 12559731
chr7 2842483 2842498 HNF4G JASPAR yes 26016992
chr7 2842484 2842498 RXRB JASPAR yes 12559732
chr7 2842484 2842498 RXRG JASPAR yes 12559733
chr7 2842484 2842498 RXRB JASPAR yes 26016993
chr7 2842484 2842498 RXRG JASPAR yes 26016994
chr7 2842484 2842499 HNF4A JASPAR yes 12559734
chr7 2842484 2842499 HNF4A JASPAR yes 26016995
chr7 2842488 2842498 RORA JASPAR yes 12559735
chr7 2842488 2842498 RORA JASPAR yes 26016996
chr7 2842489 2842500 ESRRA JASPAR yes 12559736
chr7 2842489 2842500 ESRRA JASPAR yes 26016997
chr7 2842489 2842502 NR2F1 JASPAR yes 12559737
chr7 2842489 2842502 NR2F1 JASPAR yes 26016998
chr7 2842491 2842499 NR4A2 JASPAR yes 12559738
chr7 2842491 2842499 NR4A2 JASPAR yes 26016999
chr7 2842492 2842507 ESR2 JASPAR yes 12559739
chr7 2842492 2842507 ESR2 JASPAR yes 26017000
chr7 2842493 2842497 ESR1 TRANSFAC yes 12559740
chr7 2842493 2842497 ESR1 TRANSFAC yes 26017001
SNP sites on vista54900[chr7:2842322-2842519]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 2842426 rs117715755 C T
EP300 FOXA1 FOXA2 NFIC
9586311
chr7 2842488 rs537240096 T C
EP300 FOXA1 FOXA2 HNF4A HNF4G NFIC RORA RXRB RXRG
9586312
Genes possibly regulated by vista54900[chr7:2842322-2842519]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 2767746 2883958 - GNA12 ENSG00000146535.9 2883958 0.67 1.0 7181 58561
Expression level of Genes
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miRNAs possibly regulated by vista54900[chr7:2842322-2842519]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results