EnhancerDB
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  3. rs537240096[chr7:2842488]
Enhancers that have rs537240096[chr7:2842488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 2838125 2881021 enh23934
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr7 2842322 2842519 vista54900
VISTA
Transcript factors that have rs537240096[chr7:2842488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 2842230 2842574 NFIC UCSC Txn Factor no Conserved 108543069
chr7 2842240 2842548 FOXA1 UCSC Txn Factor no Conserved 108543070
chr7 2842267 2842525 FOXA2 UCSC Txn Factor no Conserved 108543071
chr7 2842270 2842515 EP300 UCSC Txn Factor no Conserved 108543072
chr7 2842483 2842498 HNF4G JASPAR yes 12559731
chr7 2842483 2842498 HNF4G JASPAR yes 26016992
chr7 2842484 2842498 RXRB JASPAR yes 12559732
chr7 2842484 2842498 RXRG JASPAR yes 12559733
chr7 2842484 2842498 RXRB JASPAR yes 26016993
chr7 2842484 2842498 RXRG JASPAR yes 26016994
chr7 2842484 2842499 HNF4A JASPAR yes 12559734
chr7 2842484 2842499 HNF4A JASPAR yes 26016995
chr7 2842488 2842498 RORA JASPAR yes 12559735
chr7 2842488 2842498 RORA JASPAR yes 26016996
Genes associated with rs537240096[chr7:2842488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More