EnhancerDB
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  3. vista5550[chr1:232362022-232362384]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5550[chr1:232362022-232362384]
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Tissue distribution of vista5550
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Transcription factor that possibly regulate vista5550[chr1:232362022-232362384]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 232362011 232362022 ETV2 JASPAR yes 36144906
chr1 232362011 232362022 ETV2 JASPAR yes 118480494
chr1 232362011 232362024 ELF1 JASPAR yes 36144907
chr1 232362011 232362024 ELF1 JASPAR yes 118480495
chr1 232362018 232362033 RUNX2 JASPAR yes 36144909
chr1 232362018 232362033 RUNX2 JASPAR yes 118480496
chr1 232362022 232362032 RUNX3 JASPAR yes 36144910
chr1 232362022 232362032 RUNX3 JASPAR yes 118480497
chr1 232362023 232362032 RUNX2 JASPAR yes 36144911
chr1 232362023 232362032 RUNX2 JASPAR yes 118480498
chr1 232362043 232362049 TCF4 TRANSFAC yes 36144912
chr1 232362043 232362049 TCF4 TRANSFAC yes 118480499
chr1 232362044 232362058 FOXF2 JASPAR yes 36144913
chr1 232362044 232362058 FOXF2 JASPAR yes 118480500
chr1 232362045 232362053 FOXG1 JASPAR yes 36144914
chr1 232362045 232362053 FOXO3 JASPAR yes 36144915
chr1 232362045 232362053 FOXG1 JASPAR yes 118480501
chr1 232362045 232362053 FOXO3 JASPAR yes 118480502
chr1 232362046 232362056 HOXA13 JASPAR yes 36144916
chr1 232362046 232362056 HOXD13 JASPAR yes 36144917
chr1 232362046 232362056 HOXA13 JASPAR yes 118480503
chr1 232362046 232362056 HOXD13 JASPAR yes 118480504
chr1 232362046 232362057 HOXC13 JASPAR yes 36144918
chr1 232362046 232362057 HOXD12 JASPAR yes 36144919
chr1 232362046 232362057 HOXC13 JASPAR yes 118480505
chr1 232362046 232362057 HOXD12 JASPAR yes 118480506
chr1 232362081 232362092 ESRRA JASPAR yes 36144920
chr1 232362081 232362092 ESRRA JASPAR yes 118480507
chr1 232362083 232362095 TFAP2A JASPAR yes 36144921
chr1 232362083 232362095 TFAP2B JASPAR yes 36144922
chr1 232362083 232362095 TFAP2C JASPAR yes 36144923
chr1 232362083 232362095 TFAP2A JASPAR yes 118480508
chr1 232362083 232362095 TFAP2B JASPAR yes 118480509
chr1 232362083 232362095 TFAP2C JASPAR yes 118480510
chr1 232362083 232362098 TFAP2A JASPAR yes 36144924
chr1 232362083 232362098 TFAP2C JASPAR yes 36144925
chr1 232362083 232362098 TFAP2A JASPAR yes 118480511
chr1 232362083 232362098 TFAP2C JASPAR yes 118480512
chr1 232362133 232362138 MYB TRANSFAC yes 36144926
chr1 232362133 232362138 MYB TRANSFAC yes 118480513
chr1 232362150 232362169 REST JASPAR yes 36144927
chr1 232362150 232362169 REST JASPAR yes 118480514
chr1 232362172 232362187 IRF9 JASPAR yes 36144928
chr1 232362172 232362187 IRF9 JASPAR yes 118480515
chr1 232362172 232362192 RREB1 JASPAR yes 36144929
chr1 232362172 232362192 RREB1 JASPAR yes 118480516
chr1 232362204 232362217 ATF4 JASPAR yes 36144930
chr1 232362204 232362217 ATF4 JASPAR yes 118480517
chr1 232362217 232362231 RXRB JASPAR yes 36144931
chr1 232362217 232362231 RXRG JASPAR yes 36144932
chr1 232362217 232362231 RXRB JASPAR yes 118480518
chr1 232362217 232362231 RXRG JASPAR yes 118480519
chr1 232362236 232362239 MYB TRANSFAC yes 36144933
chr1 232362236 232362239 MYB TRANSFAC yes 118480520
chr1 232362238 232362256 IRF2 JASPAR yes 36144934
chr1 232362238 232362256 IRF2 JASPAR yes 118480521
chr1 232362243 232362255 IRF1 JASPAR yes 36144935
chr1 232362243 232362255 IRF1 JASPAR yes 118480522
chr1 232362246 232362262 POU4F2 JASPAR yes 36144936
chr1 232362246 232362262 POU4F2 JASPAR yes 118480523
chr1 232362257 232362263 TCF4 TRANSFAC yes 36144937
chr1 232362257 232362263 TCF4 TRANSFAC yes 118480524
chr1 232362281 232362296 ZIC3 JASPAR yes 36144938
chr1 232362281 232362296 ZIC4 JASPAR yes 36144939
chr1 232362281 232362296 ZIC3 JASPAR yes 118480525
chr1 232362281 232362296 ZIC4 JASPAR yes 118480526
chr1 232362282 232362296 ZIC1 JASPAR yes 36144940
chr1 232362282 232362296 ZIC1 JASPAR yes 118480527
chr1 232362284 232362296 NHLH1 JASPAR yes 36144941
chr1 232362284 232362296 NHLH1 JASPAR yes 118480528
chr1 232362285 232362294 SNAI2 JASPAR yes 36144942
chr1 232362285 232362294 SNAI2 JASPAR yes 118480529
chr1 232362285 232362295 TCF3 JASPAR yes 36144943
chr1 232362285 232362295 TCF4 JASPAR yes 36144944
chr1 232362285 232362295 TCF3 JASPAR yes 118480530
chr1 232362285 232362295 TCF4 JASPAR yes 118480531
chr1 232362287 232362296 ZEB1 JASPAR yes 36144945
chr1 232362287 232362296 ZEB1 JASPAR yes 118480532
chr1 232362289 232362294 SP1 TRANSFAC yes 36144946
chr1 232362289 232362294 SP1 TRANSFAC yes 118480533
chr1 232362292 232362296 LFA1 TRANSFAC yes 36144947
chr1 232362292 232362296 LFA1 TRANSFAC yes 118480534
chr1 232362318 232362326 MEIS2 JASPAR yes 36144948
chr1 232362318 232362326 MEIS3 JASPAR yes 36144949
chr1 232362318 232362326 MEIS2 JASPAR yes 118480535
chr1 232362318 232362326 MEIS3 JASPAR yes 118480536
chr1 232362318 232362331 EOMES JASPAR yes 36144950
chr1 232362318 232362331 EOMES JASPAR yes 118480537
chr1 232362319 232362323 NFE TRANSFAC yes 36144951
chr1 232362319 232362323 NFE TRANSFAC yes 118480538
chr1 232362320 232362330 TBR1 JASPAR yes 36144952
chr1 232362320 232362330 TBR1 JASPAR yes 118480539
chr1 232362320 232362340 TBX19 JASPAR yes 36144953
chr1 232362320 232362340 TBX19 JASPAR yes 118480540
chr1 232362322 232362338 T JASPAR yes 36144954
chr1 232362322 232362338 T JASPAR yes 118480541
chr1 232362324 232362337 ZBTB18 JASPAR yes 36144955
chr1 232362324 232362337 ZBTB18 JASPAR yes 118480542
chr1 232362337 232362347 SP1 JASPAR yes 36144956
chr1 232362337 232362347 SP1 JASPAR yes 118480543
chr1 232362347 232362368 IRF1 JASPAR yes 36144957
chr1 232362347 232362368 IRF1 JASPAR yes 118480544
chr1 232362348 232362363 FOXP1 JASPAR yes 36144958
chr1 232362348 232362363 FOXP1 JASPAR yes 118480545
chr1 232362348 232362369 IRF1 JASPAR yes 36144959
chr1 232362348 232362369 IRF1 JASPAR yes 118480546
chr1 232362350 232362365 FOXP1 JASPAR yes 36144960
chr1 232362350 232362365 FOXP1 JASPAR yes 118480547
chr1 232362350 232362371 IRF1 JASPAR yes 36144961
chr1 232362350 232362371 IRF1 JASPAR yes 118480548
chr1 232362351 232362372 IRF1 JASPAR yes 36144962
chr1 232362351 232362372 IRF1 JASPAR yes 118480549
chr1 232362352 232362367 FOXP1 JASPAR yes 36144963
chr1 232362352 232362367 FOXP1 JASPAR yes 118480550
chr1 232362352 232362373 IRF1 JASPAR yes 36144964
chr1 232362352 232362373 IRF1 JASPAR yes 118480551
chr1 232362353 232362368 FOXP1 JASPAR yes 36144965
chr1 232362353 232362368 FOXP1 JASPAR yes 118480552
chr1 232362353 232362374 IRF1 JASPAR yes 36144966
chr1 232362353 232362374 IRF1 JASPAR yes 118480553
chr1 232362354 232362369 FOXP1 JASPAR yes 36144967
chr1 232362354 232362369 FOXP1 JASPAR yes 118480554
chr1 232362354 232362375 IRF1 JASPAR yes 36144968
chr1 232362354 232362375 IRF1 JASPAR yes 118480555
chr1 232362355 232362370 FOXP1 JASPAR yes 36144969
chr1 232362355 232362370 FOXP1 JASPAR yes 118480556
chr1 232362355 232362376 IRF1 JASPAR yes 36144970
chr1 232362355 232362376 IRF1 JASPAR yes 118480557
chr1 232362356 232362371 FOXP1 JASPAR yes 36144971
chr1 232362356 232362371 FOXP1 JASPAR yes 118480558
chr1 232362356 232362377 IRF1 JASPAR yes 36144972
chr1 232362356 232362377 IRF1 JASPAR yes 118480559
chr1 232362357 232362372 FOXP1 JASPAR yes 36144973
chr1 232362357 232362372 FOXP1 JASPAR yes 118480560
chr1 232362357 232362378 IRF1 JASPAR yes 36144974
chr1 232362357 232362378 IRF1 JASPAR yes 118480561
chr1 232362358 232362373 FOXP1 JASPAR yes 36144975
chr1 232362358 232362373 FOXP1 JASPAR yes 118480562
chr1 232362358 232362379 IRF1 JASPAR yes 36144976
chr1 232362358 232362379 IRF1 JASPAR yes 118480563
chr1 232362359 232362374 FOXP1 JASPAR yes 36144977
chr1 232362359 232362374 FOXP1 JASPAR yes 118480564
chr1 232362359 232362380 IRF1 JASPAR yes 36144978
chr1 232362359 232362380 IRF1 JASPAR yes 118480565
chr1 232362360 232362375 FOXP1 JASPAR yes 36144979
chr1 232362360 232362375 FOXP1 JASPAR yes 118480566
chr1 232362360 232362381 IRF1 JASPAR yes 36144980
chr1 232362360 232362381 IRF1 JASPAR yes 118480567
chr1 232362361 232362376 FOXP1 JASPAR yes 36144981
chr1 232362361 232362376 FOXP1 JASPAR yes 118480568
chr1 232362361 232362382 IRF1 JASPAR yes 36144982
chr1 232362361 232362382 IRF1 JASPAR yes 118480569
chr1 232362362 232362377 FOXP1 JASPAR yes 36144983
chr1 232362362 232362377 FOXP1 JASPAR yes 118480570
chr1 232362363 232362378 FOXP1 JASPAR yes 36144984
chr1 232362363 232362378 FOXP1 JASPAR yes 118480571
chr1 232362364 232362379 FOXP1 JASPAR yes 36144985
chr1 232362364 232362379 FOXP1 JASPAR yes 118480572
chr1 232362365 232362380 FOXP1 JASPAR yes 36144986
chr1 232362365 232362380 FOXP1 JASPAR yes 118480573
chr1 232362366 232362381 FOXP1 JASPAR yes 36144987
chr1 232362366 232362381 FOXP1 JASPAR yes 118480574
chr1 232362367 232362382 FOXP1 JASPAR yes 36144988
chr1 232362367 232362382 FOXP1 JASPAR yes 118480575
chr1 232362368 232362383 FOXP1 JASPAR yes 36144989
chr1 232362368 232362383 FOXP1 JASPAR yes 118480576
chr1 232362370 232362385 MEF2C JASPAR yes 36144990
chr1 232362370 232362385 MEF2C JASPAR yes 118480577
chr1 232362376 232362387 NFIL3 JASPAR yes 36144991
chr1 232362376 232362387 NFIL3 JASPAR yes 118480578
SNP sites on vista5550[chr1:232362022-232362384]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 232362050 rs114155543 T A
FOXF2 FOXG1 FOXO3 HOXA13 HOXC13 HOXD12 HOXD13
1028047
chr1 232362158 rs188193269 C T
REST
1028048
chr1 232362353 rs540378027 G GTT
FOXP1 IRF1
1028049
chr1 232362364 rs572648609 T G
FOXP1 IRF1
1028050
chr1 232362368 rs535063596 T G
FOXP1 IRF1
1028051
Genes possibly regulated by vista5550[chr1:232362022-232362384]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5550[chr1:232362022-232362384]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results