EnhancerDB
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  3. vista5561[chr1:232746522-232746891]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5561[chr1:232746522-232746891]
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Tissue distribution of vista5561
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Transcription factor that possibly regulate vista5561[chr1:232746522-232746891]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 232746505 232746525 TP63 JASPAR yes 36176796
chr1 232746505 232746525 TP63 JASPAR yes 118480986
chr1 232746507 232746522 TP53 JASPAR yes 36176797
chr1 232746507 232746522 TP53 JASPAR yes 118480987
chr1 232746544 232746554 ALX3 JASPAR yes 36176798
chr1 232746544 232746554 EMX1 JASPAR yes 36176799
chr1 232746544 232746554 EMX2 JASPAR yes 36176800
chr1 232746544 232746554 EVX2 JASPAR yes 36176801
chr1 232746544 232746554 GSX2 JASPAR yes 36176802
chr1 232746544 232746554 HOXB2 JASPAR yes 36176803
chr1 232746544 232746554 HOXB3 JASPAR yes 36176804
chr1 232746544 232746554 MEOX1 JASPAR yes 36176805
chr1 232746544 232746554 MEOX2 JASPAR yes 36176806
chr1 232746544 232746554 MIXL1 JASPAR yes 36176807
chr1 232746544 232746554 MNX1 JASPAR yes 36176808
chr1 232746544 232746554 RAX JASPAR yes 36176809
chr1 232746544 232746554 ALX3 JASPAR yes 118480988
chr1 232746544 232746554 EMX1 JASPAR yes 118480989
chr1 232746544 232746554 EMX2 JASPAR yes 118480990
chr1 232746544 232746554 EVX2 JASPAR yes 118480991
chr1 232746544 232746554 GSX2 JASPAR yes 118480992
chr1 232746544 232746554 HOXB2 JASPAR yes 118480993
chr1 232746544 232746554 HOXB3 JASPAR yes 118480994
chr1 232746544 232746554 MEOX1 JASPAR yes 118480995
chr1 232746544 232746554 MEOX2 JASPAR yes 118480996
chr1 232746544 232746554 MIXL1 JASPAR yes 118480997
chr1 232746544 232746554 MNX1 JASPAR yes 118480998
chr1 232746544 232746554 RAX JASPAR yes 118480999
chr1 232746544 232746555 HOXA10 JASPAR yes 36176810
chr1 232746544 232746555 HOXA10 JASPAR yes 118481000
chr1 232746545 232746553 LMX1A JASPAR yes 36176811
chr1 232746545 232746553 LMX1B JASPAR yes 36176812
chr1 232746545 232746553 NKX6-1 JASPAR yes 36176813
chr1 232746545 232746553 NKX6-2 JASPAR yes 36176814
chr1 232746545 232746553 PDX1 JASPAR yes 36176815
chr1 232746545 232746553 VAX1 JASPAR yes 36176816
chr1 232746545 232746553 VAX2 JASPAR yes 36176817
chr1 232746545 232746553 VSX1 JASPAR yes 36176818
chr1 232746545 232746553 LMX1A JASPAR yes 118481001
chr1 232746545 232746553 LMX1B JASPAR yes 118481002
chr1 232746545 232746553 NKX6-1 JASPAR yes 118481003
chr1 232746545 232746553 NKX6-2 JASPAR yes 118481004
chr1 232746545 232746553 PDX1 JASPAR yes 118481005
chr1 232746545 232746553 VAX1 JASPAR yes 118481006
chr1 232746545 232746553 VAX2 JASPAR yes 118481007
chr1 232746545 232746553 VSX1 JASPAR yes 118481008
chr1 232746550 232746564 SPIC JASPAR yes 36176819
chr1 232746550 232746564 SPIC JASPAR yes 118481009
chr1 232746554 232746559 TFAP2A TRANSFAC yes 36176820
chr1 232746554 232746559 TFAP2A TRANSFAC yes 118481010
chr1 232746554 232746560 MZF1 JASPAR yes 36176821
chr1 232746554 232746560 MZF1 JASPAR yes 118481011
chr1 232746557 232746563 PEA3 TRANSFAC yes 36176822
chr1 232746557 232746563 PEA3 TRANSFAC yes 118481012
chr1 232746586 232746589 MYB TRANSFAC yes 36176823
chr1 232746586 232746589 MYB TRANSFAC yes 118481013
chr1 232746593 232746597 YY1 TRANSFAC yes 36176824
chr1 232746593 232746597 YY1 TRANSFAC yes 118481014
chr1 232746609 232746630 IRF1 JASPAR yes 36176825
chr1 232746609 232746630 IRF1 JASPAR yes 118481015
chr1 232746610 232746616 TBP TRANSFAC yes 36176826
chr1 232746610 232746616 TBP TRANSFAC yes 118481016
chr1 232746615 232746636 IRF1 JASPAR yes 36176827
chr1 232746615 232746636 IRF1 JASPAR yes 118481017
chr1 232746629 232746644 MEF2A JASPAR yes 36176828
chr1 232746629 232746644 MEF2A JASPAR yes 118481018
chr1 232746631 232746643 MEF2A JASPAR yes 36176829
chr1 232746631 232746643 MEF2A JASPAR yes 118481019
chr1 232746633 232746637 YY1 TRANSFAC yes 36176830
chr1 232746633 232746637 YY1 TRANSFAC yes 118481020
chr1 232746640 232746652 MEF2D JASPAR yes 36176831
chr1 232746640 232746652 MEF2D JASPAR yes 118481021
chr1 232746642 232746645 MYB TRANSFAC yes 36176832
chr1 232746642 232746645 MYB TRANSFAC yes 118481022
chr1 232746642 232746651 SOX9 JASPAR yes 36176833
chr1 232746642 232746651 SOX9 JASPAR yes 118481023
chr1 232746735 232746751 ZNF143 JASPAR yes 36176834
chr1 232746735 232746751 ZNF143 JASPAR yes 118481024
chr1 232746744 232746757 ZBTB18 JASPAR yes 36176835
chr1 232746744 232746757 ZBTB18 JASPAR yes 118481025
chr1 232746746 232746756 FIGLA JASPAR yes 36176836
chr1 232746746 232746756 ID4 JASPAR yes 36176837
chr1 232746746 232746756 TCF3 JASPAR yes 36176838
chr1 232746746 232746756 TCF4 JASPAR yes 36176839
chr1 232746746 232746756 FIGLA JASPAR yes 118481026
chr1 232746746 232746756 ID4 JASPAR yes 118481027
chr1 232746746 232746756 TCF3 JASPAR yes 118481028
chr1 232746746 232746756 TCF4 JASPAR yes 118481029
chr1 232746749 232746766 ZNF410 JASPAR yes 36176840
chr1 232746749 232746766 ZNF410 JASPAR yes 118481030
chr1 232746758 232746764 MAZ TRANSFAC yes 36176841
chr1 232746758 232746764 MAZ TRANSFAC yes 118481031
chr1 232746762 232746776 PLAG1 JASPAR yes 36176842
chr1 232746762 232746776 PLAG1 JASPAR yes 118481032
chr1 232746775 232746781 GATA3 JASPAR yes 36176843
chr1 232746775 232746781 GATA3 JASPAR yes 118481033
chr1 232746783 232746789 JUN TRANSFAC yes 36176844
chr1 232746783 232746789 JUN TRANSFAC yes 118481034
chr1 232746792 232746797 SP1 TRANSFAC yes 36176845
chr1 232746792 232746797 SP1 TRANSFAC yes 118481035
chr1 232746800 232746810 MZF1 JASPAR yes 36176846
chr1 232746800 232746810 MZF1 JASPAR yes 118481036
chr1 232746810 232746825 RUNX2 JASPAR yes 36176847
chr1 232746810 232746825 RUNX2 JASPAR yes 118481037
chr1 232746818 232746832 JUN JASPAR yes 36176848
chr1 232746818 232746832 JUN JASPAR yes 118481038
chr1 232746821 232746832 JUNB JASPAR yes 36176849
chr1 232746821 232746832 JUNB JASPAR yes 118481039
chr1 232746824 232746830 JUN TRANSFAC yes 36176850
chr1 232746824 232746830 JUN TRANSFAC yes 118481040
chr1 232746856 232746877 IRF1 JASPAR yes 36176851
chr1 232746856 232746877 IRF1 JASPAR yes 118481041
chr1 232746859 232746873 SPI1 JASPAR yes 36176852
chr1 232746859 232746873 SPI1 JASPAR yes 118481042
chr1 232746860 232746874 IRF8 JASPAR yes 36176853
chr1 232746860 232746874 IRF8 JASPAR yes 118481043
chr1 232746865 232746878 POU2F2 JASPAR yes 36176854
chr1 232746865 232746878 POU2F2 JASPAR yes 118481044
chr1 232746874 232746888 SPI1 JASPAR yes 36176855
chr1 232746874 232746888 SPIC JASPAR yes 36176856
chr1 232746874 232746888 SPI1 JASPAR yes 118481045
chr1 232746874 232746888 SPIC JASPAR yes 118481046
chr1 232746877 232746898 ZNF263 JASPAR yes 36176857
chr1 232746877 232746898 ZNF263 JASPAR yes 118481047
chr1 232746878 232746899 ZNF263 JASPAR yes 36176858
chr1 232746878 232746899 ZNF263 JASPAR yes 118481048
chr1 232746882 232746886 YY1 TRANSFAC yes 36176859
chr1 232746882 232746886 YY1 TRANSFAC yes 118481049
SNP sites on vista5561[chr1:232746522-232746891]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 232746636 rs536339125 T C
IRF1 MEF2A YY1
1031220
chr1 232746676 rs73099528 C T no 1031221
chr1 232746688 rs145735274 G A no 1031222
chr1 232746866 rs4649393 C T
IRF1 IRF8 POU2F2 SPI1
1031223
Genes possibly regulated by vista5561[chr1:232746522-232746891]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 232533711 232697304 - SIPA1L2 ENSG00000116991.6 232697304 0.81 1.0 1955 50782
Expression level of Genes
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miRNAs possibly regulated by vista5561[chr1:232746522-232746891]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results