EnhancerDB
  1. Home
  2. SNP
  3. rs4649393[chr1:232746866]
Enhancers that have rs4649393[chr1:232746866]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
chr1 232746522 232746891 vista5561
VISTA
Transcript factors that have rs4649393[chr1:232746866]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232746781 232746985 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107879434
chr1 232746856 232746877 IRF1 JASPAR yes 36176851
chr1 232746856 232746877 IRF1 JASPAR yes 118481041
chr1 232746859 232746873 SPI1 JASPAR yes 36176852
chr1 232746859 232746873 SPI1 JASPAR yes 118481042
chr1 232746860 232746874 IRF8 JASPAR yes 36176853
chr1 232746860 232746874 IRF8 JASPAR yes 118481043
chr1 232746865 232746878 POU2F2 JASPAR yes 36176854
chr1 232746865 232746878 POU2F2 JASPAR yes 118481044
Genes associated with rs4649393[chr1:232746866], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More