EnhancerDB
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  3. vista5597[chr1:234625475-234625843]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5597[chr1:234625475-234625843]
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Tissue distribution of vista5597
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Transcription factor that possibly regulate vista5597[chr1:234625475-234625843]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234625491 234625505 E2F7 JASPAR yes 36277906
chr1 234625491 234625505 E2F7 JASPAR yes 118482513
chr1 234625495 234625504 NKX3-2 JASPAR yes 36277907
chr1 234625495 234625504 NKX3-2 JASPAR yes 118482514
chr1 234625495 234625505 NKX2-3 JASPAR yes 36277908
chr1 234625495 234625505 NKX2-3 JASPAR yes 118482515
chr1 234625496 234625504 ISL2 JASPAR yes 36277909
chr1 234625496 234625504 ISL2 JASPAR yes 118482516
chr1 234625496 234625505 NKX2-8 JASPAR yes 36277910
chr1 234625496 234625505 NKX2-8 JASPAR yes 118482517
chr1 234625532 234625546 SPI1 JASPAR yes 36277911
chr1 234625532 234625546 SPIC JASPAR yes 36277912
chr1 234625532 234625546 SPI1 JASPAR yes 118482518
chr1 234625532 234625546 SPIC JASPAR yes 118482519
chr1 234625537 234625544 PEA3 TRANSFAC yes 36277913
chr1 234625537 234625544 PEA3 TRANSFAC yes 118482520
chr1 234625558 234625561 MYB TRANSFAC yes 36277914
chr1 234625558 234625561 MYB TRANSFAC yes 118482521
chr1 234625580 234625587 NKX3-1 JASPAR yes 36277915
chr1 234625580 234625587 NKX3-1 JASPAR yes 118482522
chr1 234625594 234625608 GLIS2 JASPAR yes 36277916
chr1 234625594 234625608 GLIS3 JASPAR yes 36277917
chr1 234625594 234625608 ZIC1 JASPAR yes 36277918
chr1 234625594 234625608 GLIS2 JASPAR yes 118482523
chr1 234625594 234625608 GLIS3 JASPAR yes 118482524
chr1 234625594 234625608 ZIC1 JASPAR yes 118482525
chr1 234625594 234625609 ZIC3 JASPAR yes 36277919
chr1 234625594 234625609 ZIC4 JASPAR yes 36277920
chr1 234625594 234625609 ZIC3 JASPAR yes 118482526
chr1 234625594 234625609 ZIC4 JASPAR yes 118482527
chr1 234625610 234625615 SP1 TRANSFAC yes 36277921
chr1 234625610 234625615 SP1 TRANSFAC yes 118482528
chr1 234625627 234625632 MYC TRANSFAC yes 36277922
chr1 234625627 234625632 MYC TRANSFAC yes 118482529
chr1 234625643 234625658 AR JASPAR yes 36277923
chr1 234625643 234625658 AR JASPAR yes 118482530
chr1 234625672 234625685 NFKB1 JASPAR yes 36277924
chr1 234625672 234625685 NFKB1 JASPAR yes 118482531
chr1 234625673 234625683 NFKB1 JASPAR yes 36277925
chr1 234625673 234625683 RELA JASPAR yes 36277926
chr1 234625673 234625683 REL JASPAR yes 36277927
chr1 234625673 234625683 NFKB1 JASPAR yes 118482532
chr1 234625673 234625683 RELA JASPAR yes 118482533
chr1 234625673 234625683 REL JASPAR yes 118482534
chr1 234625673 234625684 NFKB1 JASPAR yes 36277928
chr1 234625673 234625684 NFKB1 JASPAR yes 118482535
chr1 234625674 234625684 RELA JASPAR yes 36277929
chr1 234625674 234625684 RELA JASPAR yes 118482536
chr1 234625675 234625685 RELA JASPAR yes 36277930
chr1 234625675 234625685 RELA JASPAR yes 118482537
chr1 234625718 234625737 REST JASPAR yes 36277931
chr1 234625718 234625737 REST JASPAR yes 118482538
chr1 234625735 234625748 SMAD2 JASPAR yes 36277932
chr1 234625735 234625748 SMAD2 JASPAR yes 118482539
chr1 234625736 234625750 TLX1 JASPAR yes 36277933
chr1 234625736 234625750 TLX1 JASPAR yes 118482540
chr1 234625737 234625750 SMAD2 JASPAR yes 36277934
chr1 234625737 234625750 SMAD2 JASPAR yes 118482541
chr1 234625746 234625750 H1TF2 TRANSFAC yes 36277935
chr1 234625746 234625750 NFE TRANSFAC yes 36277936
chr1 234625746 234625750 SRF TRANSFAC yes 36277937
chr1 234625746 234625750 H1TF2 TRANSFAC yes 118482542
chr1 234625746 234625750 NFE TRANSFAC yes 118482543
chr1 234625746 234625750 SRF TRANSFAC yes 118482544
chr1 234625746 234625752 NFYC TRANSFAC yes 36277938
chr1 234625746 234625752 NFYC TRANSFAC yes 118482545
chr1 234625777 234625781 TEAD2 TRANSFAC yes 36277939
chr1 234625777 234625781 TEAD2 TRANSFAC yes 118482546
chr1 234625791 234625795 H1TF2 TRANSFAC yes 36277940
chr1 234625791 234625795 NFE TRANSFAC yes 36277941
chr1 234625791 234625795 SRF TRANSFAC yes 36277942
chr1 234625791 234625795 H1TF2 TRANSFAC yes 118482547
chr1 234625791 234625795 NFE TRANSFAC yes 118482548
chr1 234625791 234625795 SRF TRANSFAC yes 118482549
chr1 234625795 234625800 ETS2 TRANSFAC yes 36277943
chr1 234625795 234625800 ETS2 TRANSFAC yes 118482550
chr1 234625800 234625811 HOXA10 JASPAR yes 36277944
chr1 234625800 234625811 HOXA10 JASPAR yes 118482551
chr1 234625801 234625810 CDX1 JASPAR yes 36277945
chr1 234625801 234625810 CDX1 JASPAR yes 118482552
chr1 234625826 234625844 NFYA JASPAR yes 36277946
chr1 234625826 234625844 NFYA JASPAR yes 118482553
chr1 234625829 234625845 NFYA JASPAR yes 36277947
chr1 234625829 234625845 NFYA JASPAR yes 118482554
chr1 234625832 234625847 NFYB JASPAR yes 36277948
chr1 234625832 234625847 NFYB JASPAR yes 118482555
SNP sites on vista5597[chr1:234625475-234625843]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234625597 rs543384291 C A
GLIS2 GLIS3 ZIC1 ZIC3 ZIC4
1042293
chr1 234625607 rs271743 T C
GLIS2 GLIS3 ZIC1 ZIC3 ZIC4
1042294
chr1 234625629 rs182695553 A G
MYC
1042295
chr1 234625667 rs12077592 A G no 1042296
Genes possibly regulated by vista5597[chr1:234625475-234625843]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 234527059 234614849 - TARBP1 ENSG00000059588.5 234614849 0.78 0.99 1963 89374
Expression level of Genes
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miRNAs possibly regulated by vista5597[chr1:234625475-234625843]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results