EnhancerDB
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  3. rs543384291[chr1:234625597]
Enhancers that have rs543384291[chr1:234625597]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 234625475 234625843 vista5597
VISTA
Transcript factors that have rs543384291[chr1:234625597]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234623930 234625736 ZNF274 GTRD no Bone Marrow (K562) 21393179
chr1 234623930 234625736 ZNF274 GTRD no Bone Marrow (K562) 107879987
chr1 234623930 234625736 ZNF274 GTRD no Bone Marrow (K562) 107879988
chr1 234624058 234625695 ZNF143 GTRD no Epithelial (MCF-7) 21393194
chr1 234624058 234625695 ZNF143 GTRD no Epithelial (MCF-7) 107880003
chr1 234624058 234625695 ZNF143 GTRD no Epithelial (MCF-7) 107880004
chr1 234625594 234625608 GLIS2 JASPAR yes 36277916
chr1 234625594 234625608 GLIS3 JASPAR yes 36277917
chr1 234625594 234625608 ZIC1 JASPAR yes 36277918
chr1 234625594 234625608 GLIS2 JASPAR yes 118482523
chr1 234625594 234625608 GLIS3 JASPAR yes 118482524
chr1 234625594 234625608 ZIC1 JASPAR yes 118482525
chr1 234625594 234625609 ZIC3 JASPAR yes 36277919
chr1 234625594 234625609 ZIC4 JASPAR yes 36277920
chr1 234625594 234625609 ZIC3 JASPAR yes 118482526
chr1 234625594 234625609 ZIC4 JASPAR yes 118482527
Genes associated with rs543384291[chr1:234625597], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More