EnhancerDB
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  3. vista5601[chr1:234639993-234640263]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5601[chr1:234639993-234640263]
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Tissue distribution of vista5601
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Transcription factor that possibly regulate vista5601[chr1:234639993-234640263]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234639974 234639994 PPARG JASPAR yes 36280255
chr1 234639974 234639994 PPARG JASPAR yes 118482710
chr1 234639990 234639994 NFE TRANSFAC yes 36280256
chr1 234639990 234639994 NFE TRANSFAC yes 118482711
chr1 234639990 234639995 GATA1 TRANSFAC yes 36280257
chr1 234639990 234639995 GATA1 TRANSFAC yes 118482712
chr1 234639990 234639996 GATA3 JASPAR yes 36280258
chr1 234639990 234639996 GATA3 JASPAR yes 118482713
chr1 234640013 234640019 MZF1 JASPAR yes 36280259
chr1 234640013 234640019 MZF1 JASPAR yes 118482714
chr1 234640016 234640029 POU2F2 JASPAR yes 36280260
chr1 234640016 234640029 POU2F2 JASPAR yes 118482715
chr1 234640017 234640026 POU3F4 JASPAR yes 36280261
chr1 234640017 234640026 POU5F1B JASPAR yes 36280262
chr1 234640017 234640026 POU3F4 JASPAR yes 118482716
chr1 234640017 234640026 POU5F1B JASPAR yes 118482717
chr1 234640018 234640025 POU2F1 TRANSFAC yes 36280263
chr1 234640018 234640025 POU2F2 TRANSFAC yes 36280264
chr1 234640018 234640025 POU2F1 TRANSFAC yes 118482718
chr1 234640018 234640025 POU2F2 TRANSFAC yes 118482719
chr1 234640022 234640033 DUX4 JASPAR yes 36280265
chr1 234640022 234640033 DUX4 JASPAR yes 118482720
chr1 234640043 234640059 ZNF143 JASPAR yes 36280266
chr1 234640043 234640059 ZNF143 JASPAR yes 118482721
chr1 234640066 234640071 ETS2 TRANSFAC yes 36280267
chr1 234640066 234640071 ETS2 TRANSFAC yes 118482722
chr1 234640073 234640088 ZIC3 JASPAR yes 36280268
chr1 234640073 234640088 ZIC4 JASPAR yes 36280269
chr1 234640073 234640088 ZIC3 JASPAR yes 118482723
chr1 234640073 234640088 ZIC4 JASPAR yes 118482724
chr1 234640074 234640088 GLIS3 JASPAR yes 36280270
chr1 234640074 234640088 ZIC1 JASPAR yes 36280271
chr1 234640074 234640088 GLIS3 JASPAR yes 118482725
chr1 234640074 234640088 ZIC1 JASPAR yes 118482726
chr1 234640084 234640094 ALX3 JASPAR yes 36280272
chr1 234640084 234640094 ALX3 JASPAR yes 118482727
chr1 234640085 234640098 DUXA JASPAR yes 36280273
chr1 234640085 234640098 DUXA JASPAR yes 118482728
chr1 234640086 234640097 DUX4 JASPAR yes 36280274
chr1 234640086 234640097 PHOX2A JASPAR yes 36280275
chr1 234640086 234640097 PROP1 JASPAR yes 36280276
chr1 234640086 234640097 DUX4 JASPAR yes 118482729
chr1 234640086 234640097 PHOX2A JASPAR yes 118482730
chr1 234640086 234640097 PROP1 JASPAR yes 118482731
chr1 234640088 234640093 MYB TRANSFAC yes 36280277
chr1 234640088 234640093 MYB TRANSFAC yes 118482732
chr1 234640090 234640096 JUN TRANSFAC yes 36280278
chr1 234640090 234640096 JUN TRANSFAC yes 118482733
chr1 234640095 234640105 GCM2 JASPAR yes 36280279
chr1 234640095 234640105 GCM2 JASPAR yes 118482734
chr1 234640095 234640106 GCM1 JASPAR yes 36280280
chr1 234640095 234640106 GCM1 JASPAR yes 118482735
chr1 234640109 234640115 ETS1 JASPAR yes 36280281
chr1 234640109 234640115 ETS1 JASPAR yes 118482736
chr1 234640115 234640130 MEF2C JASPAR yes 36280282
chr1 234640115 234640130 MEF2C JASPAR yes 118482737
chr1 234640139 234640150 EBF1 JASPAR yes 36280283
chr1 234640139 234640150 EBF1 JASPAR yes 118482738
chr1 234640139 234640154 ZBTB33 JASPAR yes 36280284
chr1 234640139 234640154 ZBTB33 JASPAR yes 118482739
chr1 234640161 234640165 TEAD2 TRANSFAC yes 36280285
chr1 234640161 234640165 TEAD2 TRANSFAC yes 118482740
chr1 234640161 234640166 TBP TRANSFAC yes 36280286
chr1 234640161 234640166 TBP TRANSFAC yes 118482741
chr1 234640161 234640167 TMF TRANSFAC yes 36280287
chr1 234640161 234640167 TMF TRANSFAC yes 118482742
chr1 234640167 234640180 NFKB1 JASPAR yes 36280288
chr1 234640167 234640180 NFKB2 JASPAR yes 36280289
chr1 234640167 234640180 NFKB1 JASPAR yes 118482743
chr1 234640167 234640180 NFKB2 JASPAR yes 118482744
chr1 234640168 234640178 NFKB1 JASPAR yes 36280290
chr1 234640168 234640178 RELA JASPAR yes 36280291
chr1 234640168 234640178 NFKB1 JASPAR yes 118482745
chr1 234640168 234640178 RELA JASPAR yes 118482746
chr1 234640168 234640179 NFKB1 JASPAR yes 36280292
chr1 234640168 234640179 NFKB1 JASPAR yes 118482747
chr1 234640180 234640200 TP63 JASPAR yes 36280293
chr1 234640180 234640200 TP63 JASPAR yes 118482748
chr1 234640193 234640207 TLX1 JASPAR yes 36280294
chr1 234640193 234640207 TLX1 JASPAR yes 118482749
chr1 234640228 234640234 TCF4 TRANSFAC yes 36280295
chr1 234640228 234640234 TCF4 TRANSFAC yes 118482750
chr1 234640229 234640243 TLX1 JASPAR yes 36280296
chr1 234640229 234640243 TLX1 JASPAR yes 118482751
chr1 234640257 234640269 NHLH1 JASPAR yes 36280297
chr1 234640257 234640269 NHLH1 JASPAR yes 118482752
chr1 234640258 234640268 NHLH1 JASPAR yes 36280298
chr1 234640258 234640268 NHLH1 JASPAR yes 118482753
SNP sites on vista5601[chr1:234639993-234640263]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234639993 rs536675479 A G
GATA1 GATA3 NFE PPARG
1042527
chr1 234640006 rs72765695 T G no 1042528
chr1 234640032 rs146553791 C T
DUX4
1042529
chr1 234640037 rs188456819 A T no 1042530
chr1 234640049 rs192640354 A G
ZNF143
1042531
chr1 234640115 rs671172 G A
ETS1 MEF2C
1042532
Genes possibly regulated by vista5601[chr1:234639993-234640263]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 234527059 234614849 - TARBP1 ENSG00000059588.5 234614849 0.78 0.99 1963 74856
Expression level of Genes
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miRNAs possibly regulated by vista5601[chr1:234639993-234640263]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results