EnhancerDB
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  3. rs671172[chr1:234640115]
Enhancers that have rs671172[chr1:234640115]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 234639993 234640263 vista5601
VISTA
Transcript factors that have rs671172[chr1:234640115]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234638296 234640396 ZNF274 GTRD no Liver (HepG2) 21393522
chr1 234638296 234640396 ZNF274 GTRD no Liver (HepG2) 107880067
chr1 234638298 234640490 ZNF274 GTRD no Liver (HepG2) 21393523
chr1 234638298 234640490 ZNF274 GTRD no Liver (HepG2) 107880068
chr1 234638328 234640463 ZNF274 GTRD no Liver (HepG2) 21393524
chr1 234638328 234640463 ZNF274 GTRD no Liver (HepG2) 107880069
chr1 234638453 234640289 ZBTB33 GTRD no Lung (A549) 107880070
chr1 234638518 234640627 ZBTB33 GTRD no Lung (A549) 107880071
chr1 234638580 234640751 ZBTB33 GTRD no Lung (A549) 107880072
chr1 234638663 234640568 ZBTB33 GTRD no Lung (A549) 107880073
chr1 234638756 234640494 ZNF274 GTRD no Liver (HepG2) 21393546
chr1 234638756 234640494 ZNF274 GTRD no Liver (HepG2) 107880074
chr1 234638807 234640513 ZBTB33 GTRD no Lung (A549) 107880076
chr1 234638900 234640524 ZNF274 GTRD no Liver (HepG2) 21393564
chr1 234638900 234640524 ZNF274 GTRD no Liver (HepG2) 107880079
chr1 234638902 234640415 ZNF274 GTRD no Liver (HepG2) 21393565
chr1 234638902 234640415 ZNF274 GTRD no Liver (HepG2) 107880080
chr1 234638974 234640585 ZBTB33 GTRD no Lung (A549) 107880083
chr1 234639111 234640462 ZNF274 GTRD no Liver (HepG2) 21393608
chr1 234639111 234640462 ZNF274 GTRD no Liver (HepG2) 107880086
chr1 234639682 234640519 ZNF274 GTRD no Bone Marrow (K562) 21393624
chr1 234639682 234640519 ZNF274 GTRD no Bone Marrow (K562) 107880087
chr1 234640109 234640115 ETS1 JASPAR yes 36280281
chr1 234640109 234640115 ETS1 JASPAR yes 118482736
chr1 234640115 234640130 MEF2C JASPAR yes 36280282
chr1 234640115 234640130 MEF2C JASPAR yes 118482737
Genes associated with rs671172[chr1:234640115], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More