EnhancerDB
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  3. vista5603[chr1:234658291-234658851]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5603[chr1:234658291-234658851]
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Tissue distribution of vista5603
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Transcription factor that possibly regulate vista5603[chr1:234658291-234658851]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234658282 234658632 EBF1 UCSC Txn Factor no Conserved 107880163
chr1 234658320 234658548 SPI1 UCSC Txn Factor no Conserved 107880167
chr1 234658308 234658312 LFA1 TRANSFAC yes 36283116
chr1 234658308 234658312 LFA1 TRANSFAC yes 118482811
chr1 234658315 234658330 STAT2 JASPAR yes 36283117
chr1 234658315 234658330 STAT2 JASPAR yes 118482812
chr1 234658316 234658330 STAT1 JASPAR yes 36283118
chr1 234658316 234658330 STAT1 JASPAR yes 118482813
chr1 234658317 234658325 FOXO3 JASPAR yes 36283119
chr1 234658317 234658325 FOXO3 JASPAR yes 118482814
chr1 234658317 234658327 NFATC3 JASPAR yes 36283120
chr1 234658317 234658327 NFATC3 JASPAR yes 118482815
chr1 234658324 234658337 ELF3 JASPAR yes 36283121
chr1 234658324 234658337 ELF3 JASPAR yes 118482816
chr1 234658325 234658337 EHF JASPAR yes 36283122
chr1 234658325 234658337 ELF1 JASPAR yes 36283123
chr1 234658325 234658337 ELF4 JASPAR yes 36283124
chr1 234658325 234658337 EHF JASPAR yes 118482817
chr1 234658325 234658337 ELF1 JASPAR yes 118482818
chr1 234658325 234658337 ELF4 JASPAR yes 118482819
chr1 234658325 234658338 ELF1 JASPAR yes 36283125
chr1 234658325 234658338 ELF1 JASPAR yes 118482820
chr1 234658327 234658333 ETS1 JASPAR yes 36283126
chr1 234658327 234658333 SPI1 JASPAR yes 36283127
chr1 234658327 234658333 ETS1 JASPAR yes 118482821
chr1 234658327 234658333 SPI1 JASPAR yes 118482822
chr1 234658363 234658376 ATF4 JASPAR yes 36283128
chr1 234658363 234658376 ATF4 JASPAR yes 118482823
chr1 234658372 234658387 TFAP2A JASPAR yes 36283129
chr1 234658372 234658387 TFAP2C JASPAR yes 36283130
chr1 234658372 234658387 TFAP2A JASPAR yes 118482824
chr1 234658372 234658387 TFAP2C JASPAR yes 118482825
chr1 234658381 234658391 SP1 JASPAR yes 36283131
chr1 234658381 234658391 SP1 JASPAR yes 118482826
chr1 234658383 234658389 MAZ TRANSFAC yes 36283132
chr1 234658383 234658389 MAZ TRANSFAC yes 118482827
chr1 234658388 234658392 LFA1 TRANSFAC yes 36283133
chr1 234658388 234658392 LFA1 TRANSFAC yes 118482828
chr1 234658397 234658401 LFA1 TRANSFAC yes 36283134
chr1 234658397 234658401 LFA1 TRANSFAC yes 118482829
chr1 234658406 234658418 HLF JASPAR yes 36283135
chr1 234658406 234658418 HLF JASPAR yes 118482830
chr1 234658407 234658428 IRF1 JASPAR yes 36283136
chr1 234658407 234658428 IRF1 JASPAR yes 118482831
chr1 234658411 234658426 STAT2 JASPAR yes 36283137
chr1 234658411 234658426 STAT2 JASPAR yes 118482832
chr1 234658433 234658452 REST JASPAR yes 36283138
chr1 234658433 234658452 REST JASPAR yes 118482833
chr1 234658435 234658445 MSC JASPAR yes 36283139
chr1 234658435 234658445 MSC JASPAR yes 118482834
chr1 234658473 234658488 TFAP2A JASPAR yes 36283140
chr1 234658473 234658488 TFAP2A JASPAR yes 118482835
chr1 234658476 234658488 TFAP2A JASPAR yes 36283141
chr1 234658476 234658488 TFAP2B JASPAR yes 36283142
chr1 234658476 234658488 TFAP2C JASPAR yes 36283143
chr1 234658476 234658488 TFAP2A JASPAR yes 118482836
chr1 234658476 234658488 TFAP2B JASPAR yes 118482837
chr1 234658476 234658488 TFAP2C JASPAR yes 118482838
chr1 234658488 234658493 H4TF1 TRANSFAC yes 36283144
chr1 234658488 234658493 H4TF1 TRANSFAC yes 118482839
chr1 234658489 234658497 FEV JASPAR yes 36283145
chr1 234658489 234658497 FEV JASPAR yes 118482840
chr1 234658490 234658505 RFX5 JASPAR yes 36283146
chr1 234658490 234658505 RFX5 JASPAR yes 118482841
chr1 234658494 234658509 RUNX2 JASPAR yes 36283147
chr1 234658494 234658509 RUNX2 JASPAR yes 118482842
chr1 234658559 234658565 NFIC JASPAR yes 36283148
chr1 234658559 234658565 NFIC JASPAR yes 118482843
chr1 234658564 234658581 RARA JASPAR yes 36283149
chr1 234658564 234658581 RARA JASPAR yes 118482844
chr1 234658569 234658580 EBF1 JASPAR yes 36283150
chr1 234658569 234658580 EBF1 JASPAR yes 118482845
chr1 234658597 234658608 BATF JASPAR yes 36283151
chr1 234658597 234658608 BATF JASPAR yes 118482846
chr1 234658614 234658624 GSC2 JASPAR yes 36283152
chr1 234658614 234658624 GSC JASPAR yes 36283153
chr1 234658614 234658624 GSC2 JASPAR yes 118482847
chr1 234658614 234658624 GSC JASPAR yes 118482848
chr1 234658615 234658623 OTX1 JASPAR yes 36283154
chr1 234658615 234658623 OTX2 JASPAR yes 36283155
chr1 234658615 234658623 RHOXF1 JASPAR yes 36283156
chr1 234658615 234658623 OTX1 JASPAR yes 118482849
chr1 234658615 234658623 OTX2 JASPAR yes 118482850
chr1 234658615 234658623 RHOXF1 JASPAR yes 118482851
chr1 234658615 234658624 PITX3 JASPAR yes 36283157
chr1 234658615 234658624 PITX3 JASPAR yes 118482852
chr1 234658619 234658627 ISL2 JASPAR yes 36283158
chr1 234658619 234658627 ISL2 JASPAR yes 118482853
chr1 234658619 234658628 NKX3-2 JASPAR yes 36283159
chr1 234658619 234658628 NKX3-2 JASPAR yes 118482854
chr1 234658626 234658630 YY1 TRANSFAC yes 36283160
chr1 234658626 234658630 YY1 TRANSFAC yes 118482855
chr1 234658633 234658636 MYB TRANSFAC yes 36283161
chr1 234658633 234658636 MYB TRANSFAC yes 118482856
chr1 234658635 234658645 ZNF740 JASPAR yes 36283162
chr1 234658635 234658645 ZNF740 JASPAR yes 118482857
chr1 234658649 234658653 YY1 TRANSFAC yes 36283163
chr1 234658649 234658653 YY1 TRANSFAC yes 118482858
chr1 234658656 234658659 MYB TRANSFAC yes 36283164
chr1 234658656 234658659 MYB TRANSFAC yes 118482859
chr1 234658689 234658694 MYB TRANSFAC yes 36283165
chr1 234658689 234658694 MYB TRANSFAC yes 118482860
chr1 234658720 234658736 RFX3 JASPAR yes 36283166
chr1 234658720 234658736 RFX5 JASPAR yes 36283167
chr1 234658720 234658736 RFX3 JASPAR yes 118482861
chr1 234658720 234658736 RFX5 JASPAR yes 118482862
chr1 234658721 234658740 RFX2 JASPAR yes 36283168
chr1 234658721 234658740 RFX2 JASPAR yes 118482863
chr1 234658739 234658742 MYB TRANSFAC yes 36283169
chr1 234658739 234658742 MYB TRANSFAC yes 118482864
chr1 234658740 234658756 SOX8 JASPAR yes 36283170
chr1 234658740 234658756 SOX8 JASPAR yes 118482865
chr1 234658761 234658772 FOXA1 JASPAR yes 36283171
chr1 234658761 234658772 FOXA1 JASPAR yes 118482866
chr1 234658762 234658775 NFKB1 JASPAR yes 36283172
chr1 234658762 234658775 NFKB2 JASPAR yes 36283173
chr1 234658762 234658775 NFKB1 JASPAR yes 118482867
chr1 234658762 234658775 NFKB2 JASPAR yes 118482868
chr1 234658764 234658772 FOXO3 JASPAR yes 36283174
chr1 234658764 234658772 FOXO3 JASPAR yes 118482869
chr1 234658767 234658787 RREB1 JASPAR yes 36283175
chr1 234658767 234658787 RREB1 JASPAR yes 118482870
chr1 234658786 234658790 YY1 TRANSFAC yes 36283176
chr1 234658786 234658790 YY1 TRANSFAC yes 118482871
chr1 234658786 234658800 XBP1 JASPAR yes 36283177
chr1 234658786 234658800 XBP1 JASPAR yes 118482872
chr1 234658793 234658811 MAFF JASPAR yes 36283178
chr1 234658793 234658811 MAFF JASPAR yes 118482873
chr1 234658795 234658810 MAFK JASPAR yes 36283179
chr1 234658795 234658810 MAFK JASPAR yes 118482874
chr1 234658808 234658829 ZNF263 JASPAR yes 36283180
chr1 234658808 234658829 ZNF263 JASPAR yes 118482875
chr1 234658812 234658817 ETS2 TRANSFAC yes 36283181
chr1 234658812 234658817 ETS2 TRANSFAC yes 118482876
chr1 234658812 234658820 EHF JASPAR yes 36283182
chr1 234658812 234658820 EHF JASPAR yes 118482877
chr1 234658817 234658835 RARA JASPAR yes 36283183
chr1 234658817 234658835 RARA JASPAR yes 118482878
chr1 234658839 234658845 TCF4 TRANSFAC yes 36283184
chr1 234658839 234658845 TCF4 TRANSFAC yes 118482879
SNP sites on vista5603[chr1:234658291-234658851]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234658397 rs6672244 A G
EBF1 LFA1 SPI1
1042817
chr1 234658404 rs6672247 A G
EBF1 SPI1
1042818
chr1 234658437 rs192880268 G A
EBF1 MSC REST SPI1
1042819
chr1 234658468 rs114988379 G A
EBF1 SPI1
1042820
chr1 234658597 rs6657995 G C
BATF EBF1
1042821
chr1 234658608 rs74147701 T C
BATF EBF1
1042822
chr1 234658824 rs6658230 G A,T
RARA ZNF263
1042823
chr1 234658850 rs6667989 C T no 1042824
Genes possibly regulated by vista5603[chr1:234658291-234658851]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 234527059 234614849 - TARBP1 ENSG00000059588.5 234614849 0.78 0.99 1963 56558
chr1 234740015 234745271 - IRF2BP2 ENSG00000168264.6 234745271 0.68 1.0 1964 13580
Expression level of Genes
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miRNAs possibly regulated by vista5603[chr1:234658291-234658851]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results