EnhancerDB
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  3. vista5728[chr1:236083263-236083651]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5728[chr1:236083263-236083651]
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Tissue distribution of vista5728
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Transcription factor that possibly regulate vista5728[chr1:236083263-236083651]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236083465 236083689 FOSL2 UCSC Txn Factor no Conserved 107886262
chr1 236083281 236083293 FOXI1 JASPAR yes 36388095
chr1 236083281 236083293 FOXI1 JASPAR yes 118489877
chr1 236083282 236083286 TEAD2 TRANSFAC yes 36388096
chr1 236083282 236083286 TEAD2 TRANSFAC yes 118489878
chr1 236083282 236083287 TBP TRANSFAC yes 36388097
chr1 236083282 236083287 TBP TRANSFAC yes 118489879
chr1 236083283 236083291 FOXG1 JASPAR yes 36388098
chr1 236083283 236083291 FOXG1 JASPAR yes 118489880
chr1 236083285 236083305 TP63 JASPAR yes 36388099
chr1 236083285 236083305 TP63 JASPAR yes 118489881
chr1 236083286 236083304 TP53 JASPAR yes 36388100
chr1 236083286 236083304 TP63 JASPAR yes 36388101
chr1 236083286 236083304 TP53 JASPAR yes 118489882
chr1 236083286 236083304 TP63 JASPAR yes 118489883
chr1 236083288 236083303 TP53 JASPAR yes 36388102
chr1 236083288 236083303 TP53 JASPAR yes 118489884
chr1 236083313 236083327 IRF7 JASPAR yes 36388103
chr1 236083313 236083327 IRF7 JASPAR yes 118489885
chr1 236083315 236083336 IRF1 JASPAR yes 36388104
chr1 236083315 236083336 IRF1 JASPAR yes 118489886
chr1 236083317 236083332 PRDM1 JASPAR yes 36388105
chr1 236083317 236083332 STAT2 JASPAR yes 36388106
chr1 236083317 236083332 PRDM1 JASPAR yes 118489887
chr1 236083317 236083332 STAT2 JASPAR yes 118489888
chr1 236083318 236083332 STAT1 JASPAR yes 36388107
chr1 236083318 236083332 STAT1 JASPAR yes 118489889
chr1 236083319 236083331 IRF1 JASPAR yes 36388108
chr1 236083319 236083331 IRF1 JASPAR yes 118489890
chr1 236083324 236083328 YY1 TRANSFAC yes 36388109
chr1 236083324 236083328 YY1 TRANSFAC yes 118489891
chr1 236083333 236083339 JUN TRANSFAC yes 36388110
chr1 236083333 236083339 JUN TRANSFAC yes 118489892
chr1 236083365 236083373 TBX5 JASPAR yes 36388111
chr1 236083365 236083373 TBX5 JASPAR yes 118489893
chr1 236083367 236083380 ZBTB18 JASPAR yes 36388112
chr1 236083367 236083380 ZBTB18 JASPAR yes 118489894
chr1 236083376 236083384 FOXL1 JASPAR yes 36388113
chr1 236083376 236083384 FOXL1 JASPAR yes 118489895
chr1 236083382 236083385 MYB TRANSFAC yes 36388114
chr1 236083382 236083385 MYB TRANSFAC yes 118489896
chr1 236083385 236083389 YY1 TRANSFAC yes 36388115
chr1 236083385 236083389 YY1 TRANSFAC yes 118489897
chr1 236083425 236083434 NKX3-2 JASPAR yes 36388116
chr1 236083425 236083434 NKX3-2 JASPAR yes 118489898
chr1 236083434 236083438 YY1 TRANSFAC yes 36388117
chr1 236083434 236083438 YY1 TRANSFAC yes 118489899
chr1 236083459 236083474 PRDM1 JASPAR yes 36388118
chr1 236083459 236083474 PRDM1 JASPAR yes 118489900
chr1 236083461 236083482 IRF1 JASPAR yes 36388119
chr1 236083461 236083482 IRF1 JASPAR yes 118489901
chr1 236083463 236083478 PRDM1 JASPAR yes 36388120
chr1 236083463 236083478 PRDM1 JASPAR yes 118489902
chr1 236083463 236083484 ZNF263 JASPAR yes 36388121
chr1 236083463 236083484 ZNF263 JASPAR yes 118489903
chr1 236083471 236083492 IRF1 JASPAR yes 36388122
chr1 236083471 236083492 IRF1 JASPAR yes 118489904
chr1 236083472 236083493 ZNF263 JASPAR yes 36388123
chr1 236083472 236083493 ZNF263 JASPAR yes 118489905
chr1 236083475 236083479 YY1 TRANSFAC yes 36388124
chr1 236083475 236083479 YY1 TRANSFAC yes 118489906
chr1 236083476 236083497 ZNF263 JASPAR yes 36388125
chr1 236083476 236083497 ZNF263 JASPAR yes 118489907
chr1 236083496 236083499 MYB TRANSFAC yes 36388126
chr1 236083496 236083499 MYB TRANSFAC yes 118489908
chr1 236083502 236083522 RREB1 JASPAR yes 36388127
chr1 236083502 236083522 RREB1 JASPAR yes 118489909
chr1 236083504 236083515 FOXH1 JASPAR yes 36388128
chr1 236083504 236083515 FOXH1 JASPAR yes 118489910
chr1 236083505 236083516 FOXC1 JASPAR yes 36388129
chr1 236083505 236083516 FOXC1 JASPAR yes 118489911
chr1 236083505 236083517 FOXC2 JASPAR yes 36388130
chr1 236083505 236083517 FOXC2 JASPAR yes 118489912
chr1 236083513 236083522 SRY JASPAR yes 36388131
chr1 236083513 236083522 SRY JASPAR yes 118489913
chr1 236083513 236083531 NR3C1 JASPAR yes 36388132
chr1 236083513 236083531 NR3C1 JASPAR yes 118489914
chr1 236083531 236083549 MAFF JASPAR yes 36388133
chr1 236083531 236083549 MAFF JASPAR yes 118489915
chr1 236083533 236083548 MAFK JASPAR yes 36388134
chr1 236083533 236083548 MAFK JASPAR yes 118489916
chr1 236083544 236083553 NFIX JASPAR yes 36388135
chr1 236083544 236083553 NFIX JASPAR yes 118489917
chr1 236083544 236083554 NFIA JASPAR yes 36388136
chr1 236083544 236083554 NFIA JASPAR yes 118489918
chr1 236083546 236083552 NFIC JASPAR yes 36388137
chr1 236083546 236083552 NFIC JASPAR yes 118489919
chr1 236083548 236083559 ESRRA JASPAR yes 36388138
chr1 236083548 236083559 ESRRB JASPAR yes 36388139
chr1 236083548 236083559 ESRRA JASPAR yes 118489920
chr1 236083548 236083559 ESRRB JASPAR yes 118489921
chr1 236083552 236083556 LFA1 TRANSFAC yes 36388140
chr1 236083552 236083556 LFA1 TRANSFAC yes 118489922
chr1 236083555 236083559 YY1 TRANSFAC yes 36388141
chr1 236083555 236083559 YY1 TRANSFAC yes 118489923
chr1 236083570 236083579 SOX9 JASPAR yes 36388142
chr1 236083570 236083579 SOX9 JASPAR yes 118489924
chr1 236083572 236083581 SRY JASPAR yes 36388143
chr1 236083572 236083581 SRY JASPAR yes 118489925
chr1 236083584 236083595 FOSL2 JASPAR yes 36388144
chr1 236083584 236083595 FOSL2 JASPAR yes 118489926
chr1 236083585 236083596 JUND JASPAR yes 36388145
chr1 236083585 236083596 JUND JASPAR yes 118489927
chr1 236083598 236083610 YY1 JASPAR yes 36388146
chr1 236083598 236083610 YY1 JASPAR yes 118489928
chr1 236083632 236083647 ZIC4 JASPAR yes 36388147
chr1 236083632 236083647 ZIC4 JASPAR yes 118489929
chr1 236083635 236083647 NHLH1 JASPAR yes 36388148
chr1 236083635 236083647 NHLH1 JASPAR yes 118489930
chr1 236083636 236083646 TFAP4 JASPAR yes 36388149
chr1 236083636 236083646 TFAP4 JASPAR yes 118489931
chr1 236083636 236083648 TAL1 JASPAR yes 36388150
chr1 236083636 236083648 TAL1 JASPAR yes 118489932
SNP sites on vista5728[chr1:236083263-236083651]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236083295 rs34265213 T C
TP53 TP63
1053212
chr1 236083437 rs115988230 T C
YY1
1053213
chr1 236083512 rs142959102 A C
FOSL2 FOXC1 FOXC2 FOXH1 RREB1
1053214
chr1 236083598 rs113120710 C A,T
FOSL2 YY1
1053215
chr1 236083606 rs78286346 T C
FOSL2 YY1
1053216
chr1 236083631 rs557947073 C A
FOSL2
1053217
Genes possibly regulated by vista5728[chr1:236083263-236083651]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235824341 236046940 - LYST ENSG00000143669.9 236046940 0.86 1.0 1972 63677
Expression level of Genes
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miRNAs possibly regulated by vista5728[chr1:236083263-236083651]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results