EnhancerDB
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  3. rs115988230[chr1:236083437]
Enhancers that have rs115988230[chr1:236083437]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236062005 236089295 enh12805
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
chr1 236083263 236083651 vista5728
VISTA
Transcript factors that have rs115988230[chr1:236083437]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236083295 236083835 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21403929
chr1 236083295 236083835 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107886252
chr1 236083363 236083807 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21403930
chr1 236083363 236083807 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107886253
chr1 236083380 236083650 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21403931
chr1 236083380 236083650 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107886254
chr1 236083393 236083909 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403932
chr1 236083393 236083909 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107886255
chr1 236083396 236083926 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403933
chr1 236083396 236083926 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107886256
chr1 236083430 236083754 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107886257
chr1 236083434 236083438 YY1 TRANSFAC yes 36388117
chr1 236083434 236083438 YY1 TRANSFAC yes 118489899
Genes associated with rs115988230[chr1:236083437], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More