EnhancerDB
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  3. vista5885[chr1:244439620-244440012]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5885[chr1:244439620-244440012]
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Tissue distribution of vista5885
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Transcription factor that possibly regulate vista5885[chr1:244439620-244440012]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 244439599 244439620 ZNF263 JASPAR yes 36723167
chr1 244439599 244439620 ZNF263 JASPAR yes 118497715
chr1 244439602 244439623 ZNF263 JASPAR yes 36723168
chr1 244439602 244439623 ZNF263 JASPAR yes 118497716
chr1 244439617 244439623 GATA3 JASPAR yes 36723169
chr1 244439617 244439623 GATA3 JASPAR yes 118497717
chr1 244439636 244439642 GATA3 JASPAR yes 36723170
chr1 244439636 244439642 GATA3 JASPAR yes 118497718
chr1 244439653 244439659 GATA3 JASPAR yes 36723171
chr1 244439653 244439659 GATA3 JASPAR yes 118497719
chr1 244439672 244439678 GATA3 JASPAR yes 36723172
chr1 244439672 244439678 GATA3 JASPAR yes 118497720
chr1 244439708 244439714 GATA3 JASPAR yes 36723173
chr1 244439708 244439714 GATA3 JASPAR yes 118497721
chr1 244439720 244439741 ZNF263 JASPAR yes 36723174
chr1 244439720 244439741 ZNF263 JASPAR yes 118497722
chr1 244439724 244439745 ZNF263 JASPAR yes 36723175
chr1 244439724 244439745 ZNF263 JASPAR yes 118497723
chr1 244439726 244439747 ZNF263 JASPAR yes 36723176
chr1 244439726 244439747 ZNF263 JASPAR yes 118497724
chr1 244439729 244439750 ZNF263 JASPAR yes 36723177
chr1 244439729 244439750 ZNF263 JASPAR yes 118497725
chr1 244439744 244439750 GATA3 JASPAR yes 36723178
chr1 244439744 244439750 GATA3 JASPAR yes 118497726
chr1 244439763 244439769 GATA3 JASPAR yes 36723179
chr1 244439763 244439769 GATA3 JASPAR yes 118497727
chr1 244439782 244439788 GATA3 JASPAR yes 36723180
chr1 244439782 244439788 GATA3 JASPAR yes 118497728
chr1 244439799 244439805 GATA3 JASPAR yes 36723181
chr1 244439799 244439805 GATA3 JASPAR yes 118497729
chr1 244439809 244439822 SMAD2 JASPAR yes 36723182
chr1 244439809 244439822 SMAD2 JASPAR yes 118497730
chr1 244439833 244439838 GATA2 JASPAR yes 36723183
chr1 244439833 244439838 GATA2 JASPAR yes 118497731
chr1 244439840 244439855 PRDM1 JASPAR yes 36723184
chr1 244439840 244439855 PRDM1 JASPAR yes 118497732
chr1 244439852 244439858 GATA3 JASPAR yes 36723185
chr1 244439852 244439858 GATA3 JASPAR yes 118497733
chr1 244439880 244439890 RELA JASPAR yes 36723186
chr1 244439880 244439890 REL JASPAR yes 36723187
chr1 244439880 244439890 RELA JASPAR yes 118497734
chr1 244439880 244439890 REL JASPAR yes 118497735
chr1 244439880 244439891 NFKB1 JASPAR yes 36723188
chr1 244439880 244439891 NFKB1 JASPAR yes 118497736
chr1 244439886 244439891 ETS2 TRANSFAC yes 36723189
chr1 244439886 244439891 ETS2 TRANSFAC yes 118497737
chr1 244439892 244439900 EHF JASPAR yes 36723190
chr1 244439892 244439900 EHF JASPAR yes 118497738
chr1 244439894 244439909 HSF1 JASPAR yes 36723191
chr1 244439894 244439909 HSF1 JASPAR yes 118497739
chr1 244439895 244439908 HSF1 JASPAR yes 36723192
chr1 244439895 244439908 HSF2 JASPAR yes 36723193
chr1 244439895 244439908 HSF4 JASPAR yes 36723194
chr1 244439895 244439908 HSF1 JASPAR yes 118497740
chr1 244439895 244439908 HSF2 JASPAR yes 118497741
chr1 244439895 244439908 HSF4 JASPAR yes 118497742
chr1 244439895 244439916 ZNF263 JASPAR yes 36723195
chr1 244439895 244439916 ZNF263 JASPAR yes 118497743
chr1 244439896 244439906 TBX21 JASPAR yes 36723196
chr1 244439896 244439906 TBX21 JASPAR yes 118497744
chr1 244439896 244439907 TBX2 JASPAR yes 36723197
chr1 244439896 244439907 TBX2 JASPAR yes 118497745
chr1 244439896 244439909 EOMES JASPAR yes 36723198
chr1 244439896 244439909 EOMES JASPAR yes 118497746
chr1 244439897 244439905 TBX15 JASPAR yes 36723199
chr1 244439897 244439905 TBX4 JASPAR yes 36723200
chr1 244439897 244439905 TBX15 JASPAR yes 118497747
chr1 244439897 244439905 TBX4 JASPAR yes 118497748
chr1 244439925 244439938 POU2F2 JASPAR yes 36723201
chr1 244439925 244439938 POU2F2 JASPAR yes 118497749
chr1 244439946 244439955 NKX3-2 JASPAR yes 36723202
chr1 244439946 244439955 NKX3-2 JASPAR yes 118497750
chr1 244439946 244439956 NKX2-3 JASPAR yes 36723203
chr1 244439946 244439956 NKX2-3 JASPAR yes 118497751
chr1 244439947 244439955 ISL2 JASPAR yes 36723204
chr1 244439947 244439955 ISL2 JASPAR yes 118497752
chr1 244439952 244439955 MYB TRANSFAC yes 36723205
chr1 244439952 244439955 MYB TRANSFAC yes 118497753
chr1 244439988 244439994 YY1 JASPAR yes 36723206
chr1 244439988 244439994 YY1 JASPAR yes 118497754
SNP sites on vista5885[chr1:244439620-244440012]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 244439691 rs2628041 A G no 1088433
chr1 244439757 rs2628042 A G no 1088434
chr1 244439811 rs576264301 A T
SMAD2
1088435
chr1 244439856 rs144654832 T G
GATA3
1088436
chr1 244439990 rs561776 A C
YY1
1088437
Genes possibly regulated by vista5885[chr1:244439620-244440012]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 244515937 244552965 + C1orf100 ENSG00000173728.6 244515937 0.83 1.0 2004 24075
Expression level of Genes
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miRNAs possibly regulated by vista5885[chr1:244439620-244440012]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results