EnhancerDB
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  3. rs561776[chr1:244439990]
Enhancers that have rs561776[chr1:244439990]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 244433245 244440527 enh27694
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus Stomach
chr1 244439620 244440012 vista5885
VISTA
Transcript factors that have rs561776[chr1:244439990]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 244438793 244440343 ZNF274 GTRD no Bone Marrow (K562) 21405155
chr1 244438793 244440343 ZNF274 GTRD no Bone Marrow (K562) 107888223
chr1 244438959 244440160 ZNF274 GTRD no Bone Marrow (K562) 21405156
chr1 244438959 244440160 ZNF274 GTRD no Bone Marrow (K562) 107888224
chr1 244439153 244440084 ZNF274 GTRD no Bone Marrow (K562) 21405157
chr1 244439153 244440084 ZNF274 GTRD no Bone Marrow (K562) 107888225
chr1 244439395 244440078 ZBTB33 GTRD no Lung (A549) 21405161
chr1 244439395 244440078 ZBTB33 GTRD no Lung (A549) 107888230
chr1 244439988 244439994 YY1 JASPAR yes 36723206
chr1 244439988 244439994 YY1 JASPAR yes 118497754
Genes associated with rs561776[chr1:244439990], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More