EnhancerDB
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  3. vista589[chr1:18998295-18998632]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista589[chr1:18998295-18998632]
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Tissue distribution of vista589
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Transcription factor that possibly regulate vista589[chr1:18998295-18998632]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 18998295 18998299 TEAD2 TRANSFAC yes 27150895
chr1 18998295 18998299 TEAD2 TRANSFAC yes 118242243
chr1 18998295 18998300 TBP TRANSFAC yes 27150896
chr1 18998295 18998300 TBP TRANSFAC yes 118242244
chr1 18998295 18998301 TFIID TRANSFAC yes 27150897
chr1 18998295 18998301 TFIID TRANSFAC yes 118242245
chr1 18998295 18998310 FOXP1 JASPAR yes 27150898
chr1 18998295 18998310 FOXP1 JASPAR yes 118242246
chr1 18998296 18998311 FOXP1 JASPAR yes 27150899
chr1 18998296 18998311 FOXP1 JASPAR yes 118242247
chr1 18998297 18998303 TBP TRANSFAC yes 27150900
chr1 18998297 18998303 TBP TRANSFAC yes 118242248
chr1 18998297 18998312 FOXP1 JASPAR yes 27150901
chr1 18998297 18998312 FOXP1 JASPAR yes 118242249
chr1 18998297 18998318 IRF1 JASPAR yes 27150902
chr1 18998297 18998318 IRF1 JASPAR yes 118242250
chr1 18998298 18998313 FOXP1 JASPAR yes 27150903
chr1 18998298 18998313 FOXP1 JASPAR yes 118242251
chr1 18998298 18998319 IRF1 JASPAR yes 27150904
chr1 18998298 18998319 IRF1 JASPAR yes 118242252
chr1 18998299 18998314 FOXP1 JASPAR yes 27150905
chr1 18998299 18998314 FOXP1 JASPAR yes 118242253
chr1 18998314 18998320 TBP TRANSFAC yes 27150906
chr1 18998314 18998320 TBP TRANSFAC yes 118242254
chr1 18998337 18998346 HIC2 JASPAR yes 27150907
chr1 18998337 18998346 HIC2 JASPAR yes 118242255
chr1 18998339 18998348 ZEB1 JASPAR yes 27150908
chr1 18998339 18998348 ZEB1 JASPAR yes 118242256
chr1 18998339 18998354 SCRT1 JASPAR yes 27150909
chr1 18998339 18998354 SCRT1 JASPAR yes 118242257
chr1 18998340 18998350 FIGLA JASPAR yes 27150910
chr1 18998340 18998350 TCF3 JASPAR yes 27150911
chr1 18998340 18998350 TCF4 JASPAR yes 27150912
chr1 18998340 18998350 FIGLA JASPAR yes 118242258
chr1 18998340 18998350 TCF3 JASPAR yes 118242259
chr1 18998340 18998350 TCF4 JASPAR yes 118242260
chr1 18998341 18998350 SNAI2 JASPAR yes 27150913
chr1 18998341 18998350 SNAI2 JASPAR yes 118242261
chr1 18998342 18998347 USF2 TRANSFAC yes 27150914
chr1 18998342 18998347 USF2 TRANSFAC yes 118242262
chr1 18998357 18998371 GLIS3 JASPAR yes 27150915
chr1 18998357 18998371 GLIS3 JASPAR yes 118242263
chr1 18998418 18998422 TEAD2 TRANSFAC yes 27150916
chr1 18998418 18998422 TEAD2 TRANSFAC yes 118242264
chr1 18998420 18998431 DUX4 JASPAR yes 27150917
chr1 18998420 18998431 PHOX2A JASPAR yes 27150918
chr1 18998420 18998431 DUX4 JASPAR yes 118242265
chr1 18998420 18998431 PHOX2A JASPAR yes 118242266
chr1 18998421 18998432 CEBPB JASPAR yes 27150919
chr1 18998421 18998432 CEBPB JASPAR yes 118242267
chr1 18998421 18998434 ATF4 JASPAR yes 27150920
chr1 18998421 18998434 ATF4 JASPAR yes 118242268
chr1 18998421 18998436 JUND JASPAR yes 27150921
chr1 18998421 18998436 JUND JASPAR yes 118242269
chr1 18998422 18998433 CEBPA JASPAR yes 27150922
chr1 18998422 18998433 CEBPA JASPAR yes 118242270
chr1 18998422 18998435 JUN JASPAR yes 27150923
chr1 18998422 18998435 JUN JASPAR yes 118242271
chr1 18998433 18998442 NKX2-8 JASPAR yes 27150924
chr1 18998433 18998442 NKX2-8 JASPAR yes 118242272
chr1 18998463 18998467 NFE TRANSFAC yes 27150925
chr1 18998463 18998467 NFE TRANSFAC yes 118242273
chr1 18998466 18998472 MYC TRANSFAC yes 27150926
chr1 18998466 18998472 MYC TRANSFAC yes 118242274
chr1 18998469 18998484 FOXP1 JASPAR yes 27150927
chr1 18998469 18998484 FOXP1 JASPAR yes 118242275
chr1 18998469 18998490 IRF1 JASPAR yes 27150928
chr1 18998469 18998490 IRF1 JASPAR yes 118242276
chr1 18998470 18998485 FOXP1 JASPAR yes 27150929
chr1 18998470 18998485 FOXP1 JASPAR yes 118242277
chr1 18998471 18998477 TBP TRANSFAC yes 27150930
chr1 18998471 18998477 TBP TRANSFAC yes 118242278
chr1 18998473 18998488 PRDM1 JASPAR yes 27150931
chr1 18998473 18998488 STAT2 JASPAR yes 27150932
chr1 18998473 18998488 PRDM1 JASPAR yes 118242279
chr1 18998473 18998488 STAT2 JASPAR yes 118242280
chr1 18998477 18998491 SPIC JASPAR yes 27150933
chr1 18998477 18998491 SPIC JASPAR yes 118242281
chr1 18998479 18998493 FOXF2 JASPAR yes 27150934
chr1 18998479 18998493 FOXF2 JASPAR yes 118242282
chr1 18998479 18998494 FOXP1 JASPAR yes 27150935
chr1 18998479 18998494 FOXP1 JASPAR yes 118242283
chr1 18998480 18998491 FOXA1 JASPAR yes 27150936
chr1 18998480 18998491 FOXA1 JASPAR yes 118242284
chr1 18998480 18998495 FOXA1 JASPAR yes 27150937
chr1 18998480 18998495 FOXA1 JASPAR yes 118242285
chr1 18998481 18998492 FOXB1 JASPAR yes 27150938
chr1 18998481 18998492 FOXC1 JASPAR yes 27150939
chr1 18998481 18998492 FOXB1 JASPAR yes 118242286
chr1 18998481 18998492 FOXC1 JASPAR yes 118242287
chr1 18998481 18998493 FOXC2 JASPAR yes 27150940
chr1 18998481 18998493 FOXC2 JASPAR yes 118242288
chr1 18998482 18998493 FOXP2 JASPAR yes 27150941
chr1 18998482 18998493 FOXP2 JASPAR yes 118242289
chr1 18998483 18998497 ONECUT3 JASPAR yes 27150942
chr1 18998483 18998497 ONECUT3 JASPAR yes 118242290
chr1 18998483 18998498 HNF1A JASPAR yes 27150943
chr1 18998483 18998498 HNF1A JASPAR yes 118242291
chr1 18998484 18998497 HNF1B JASPAR yes 27150944
chr1 18998484 18998497 HNF1B JASPAR yes 118242292
chr1 18998484 18998498 POU4F1 JASPAR yes 27150945
chr1 18998484 18998498 POU4F1 JASPAR yes 118242293
chr1 18998484 18998499 FOXA1 JASPAR yes 27150946
chr1 18998484 18998499 FOXA1 JASPAR yes 118242294
chr1 18998484 18998500 POU4F2 JASPAR yes 27150947
chr1 18998484 18998500 POU4F3 JASPAR yes 27150948
chr1 18998484 18998500 POU4F2 JASPAR yes 118242295
chr1 18998484 18998500 POU4F3 JASPAR yes 118242296
chr1 18998485 18998496 FOXB1 JASPAR yes 27150949
chr1 18998485 18998496 FOXC1 JASPAR yes 27150950
chr1 18998485 18998496 PROP1 JASPAR yes 27150951
chr1 18998485 18998496 FOXB1 JASPAR yes 118242297
chr1 18998485 18998496 FOXC1 JASPAR yes 118242298
chr1 18998485 18998496 PROP1 JASPAR yes 118242299
chr1 18998485 18998497 FOXC2 JASPAR yes 27150952
chr1 18998485 18998497 FOXC2 JASPAR yes 118242300
chr1 18998486 18998498 FOXI1 JASPAR yes 27150953
chr1 18998486 18998498 FOXI1 JASPAR yes 118242301
chr1 18998488 18998504 POU4F2 JASPAR yes 27150954
chr1 18998488 18998504 POU4F2 JASPAR yes 118242302
chr1 18998493 18998496 MYB TRANSFAC yes 27150955
chr1 18998493 18998496 MYB TRANSFAC yes 118242303
chr1 18998493 18998504 PROP1 JASPAR yes 27150956
chr1 18998493 18998504 PROP1 JASPAR yes 118242304
chr1 18998493 18998505 FOXC2 JASPAR yes 27150957
chr1 18998493 18998505 FOXC2 JASPAR yes 118242305
chr1 18998494 18998506 FOXI1 JASPAR yes 27150958
chr1 18998494 18998506 FOXI1 JASPAR yes 118242306
chr1 18998507 18998523 POU4F2 JASPAR yes 27150959
chr1 18998507 18998523 POU4F2 JASPAR yes 118242307
chr1 18998509 18998520 CDX2 JASPAR yes 27150960
chr1 18998509 18998520 CDX2 JASPAR yes 118242308
chr1 18998581 18998597 ZNF143 JASPAR yes 27150961
chr1 18998581 18998597 ZNF143 JASPAR yes 118242309
chr1 18998583 18998587 LFA1 TRANSFAC yes 27150962
chr1 18998583 18998587 LFA1 TRANSFAC yes 118242310
chr1 18998594 18998606 FOXI1 JASPAR yes 27150963
chr1 18998594 18998606 FOXI1 JASPAR yes 118242311
chr1 18998601 18998622 ZNF263 JASPAR yes 27150964
chr1 18998601 18998622 ZNF263 JASPAR yes 118242312
chr1 18998606 18998610 NFE TRANSFAC yes 27150965
chr1 18998606 18998610 NFE TRANSFAC yes 118242313
chr1 18998623 18998634 ESRRA JASPAR yes 27150966
chr1 18998623 18998634 ESRRA JASPAR yes 118242314
SNP sites on vista589[chr1:18998295-18998632]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 18998488 rs61562967 A C,T
FOXA1 FOXB1 FOXC1 FOXC2 FOXF2 FOXI1 FOXP1 FOXP2 HNF1A HNF1B IRF1 ONECUT3 POU4F1 POU4F2 POU4F3 PRDM1 PROP1 SPIC STAT2
126401
chr1 18998489 rs60910557 A T
FOXA1 FOXB1 FOXC1 FOXC2 FOXF2 FOXI1 FOXP1 FOXP2 HNF1A HNF1B IRF1 ONECUT3 POU4F1 POU4F2 POU4F3 PROP1 SPIC
126402
Genes possibly regulated by vista589[chr1:18998295-18998632]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 18957500 19075360 + PAX7 ENSG00000009709.7 18957500 0.98 1.0 251 59205
Expression level of Genes
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miRNAs possibly regulated by vista589[chr1:18998295-18998632]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results