EnhancerDB
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  3. rs61562967[chr1:18998488]
Enhancers that have rs61562967[chr1:18998488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 18991138 18999535 enh61803
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Lung (PC-9) Epithelial (MCF-7)
chr1 18998295 18998632 vista589
VISTA
Transcript factors that have rs61562967[chr1:18998488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 18997449 18998989 P63 GTRD no Skin (Keratinocyte) 107802281
chr1 18998469 18998490 IRF1 JASPAR yes 27150928
chr1 18998469 18998490 IRF1 JASPAR yes 118242276
chr1 18998473 18998488 PRDM1 JASPAR yes 27150931
chr1 18998473 18998488 STAT2 JASPAR yes 27150932
chr1 18998473 18998488 PRDM1 JASPAR yes 118242279
chr1 18998473 18998488 STAT2 JASPAR yes 118242280
chr1 18998477 18998491 SPIC JASPAR yes 27150933
chr1 18998477 18998491 SPIC JASPAR yes 118242281
chr1 18998479 18998493 FOXF2 JASPAR yes 27150934
chr1 18998479 18998493 FOXF2 JASPAR yes 118242282
chr1 18998479 18998494 FOXP1 JASPAR yes 27150935
chr1 18998479 18998494 FOXP1 JASPAR yes 118242283
chr1 18998480 18998491 FOXA1 JASPAR yes 27150936
chr1 18998480 18998491 FOXA1 JASPAR yes 118242284
chr1 18998480 18998495 FOXA1 JASPAR yes 27150937
chr1 18998480 18998495 FOXA1 JASPAR yes 118242285
chr1 18998481 18998492 FOXB1 JASPAR yes 27150938
chr1 18998481 18998492 FOXC1 JASPAR yes 27150939
chr1 18998481 18998492 FOXB1 JASPAR yes 118242286
chr1 18998481 18998492 FOXC1 JASPAR yes 118242287
chr1 18998481 18998493 FOXC2 JASPAR yes 27150940
chr1 18998481 18998493 FOXC2 JASPAR yes 118242288
chr1 18998482 18998493 FOXP2 JASPAR yes 27150941
chr1 18998482 18998493 FOXP2 JASPAR yes 118242289
chr1 18998483 18998497 ONECUT3 JASPAR yes 27150942
chr1 18998483 18998497 ONECUT3 JASPAR yes 118242290
chr1 18998483 18998498 HNF1A JASPAR yes 27150943
chr1 18998483 18998498 HNF1A JASPAR yes 118242291
chr1 18998484 18998497 HNF1B JASPAR yes 27150944
chr1 18998484 18998497 HNF1B JASPAR yes 118242292
chr1 18998484 18998498 POU4F1 JASPAR yes 27150945
chr1 18998484 18998498 POU4F1 JASPAR yes 118242293
chr1 18998484 18998499 FOXA1 JASPAR yes 27150946
chr1 18998484 18998499 FOXA1 JASPAR yes 118242294
chr1 18998484 18998500 POU4F2 JASPAR yes 27150947
chr1 18998484 18998500 POU4F3 JASPAR yes 27150948
chr1 18998484 18998500 POU4F2 JASPAR yes 118242295
chr1 18998484 18998500 POU4F3 JASPAR yes 118242296
chr1 18998485 18998496 FOXB1 JASPAR yes 27150949
chr1 18998485 18998496 FOXC1 JASPAR yes 27150950
chr1 18998485 18998496 PROP1 JASPAR yes 27150951
chr1 18998485 18998496 FOXB1 JASPAR yes 118242297
chr1 18998485 18998496 FOXC1 JASPAR yes 118242298
chr1 18998485 18998496 PROP1 JASPAR yes 118242299
chr1 18998485 18998497 FOXC2 JASPAR yes 27150952
chr1 18998485 18998497 FOXC2 JASPAR yes 118242300
chr1 18998486 18998498 FOXI1 JASPAR yes 27150953
chr1 18998486 18998498 FOXI1 JASPAR yes 118242301
chr1 18998488 18998504 POU4F2 JASPAR yes 27150954
chr1 18998488 18998504 POU4F2 JASPAR yes 118242302
Genes associated with rs61562967[chr1:18998488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More