EnhancerDB
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  3. vista593[chr1:19253034-19253391]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista593[chr1:19253034-19253391]
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Tissue distribution of vista593
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Transcription factor that possibly regulate vista593[chr1:19253034-19253391]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 19253039 19253054 RFX5 JASPAR yes 27161848
chr1 19253039 19253054 RFX5 JASPAR yes 118242484
chr1 19253043 19253062 CTCF JASPAR yes 27161849
chr1 19253043 19253062 CTCF JASPAR yes 118242485
chr1 19253048 19253059 E2F6 JASPAR yes 27161850
chr1 19253048 19253059 E2F6 JASPAR yes 118242486
chr1 19253064 19253085 REST JASPAR yes 27161851
chr1 19253064 19253085 REST JASPAR yes 118242487
chr1 19253074 19253087 ZBTB18 JASPAR yes 27161852
chr1 19253074 19253087 ZBTB18 JASPAR yes 118242488
chr1 19253093 19253103 TEAD1 JASPAR yes 27161853
chr1 19253093 19253103 TEAD4 JASPAR yes 27161854
chr1 19253093 19253103 TEAD1 JASPAR yes 118242489
chr1 19253093 19253103 TEAD4 JASPAR yes 118242490
chr1 19253093 19253105 TEAD1 JASPAR yes 27161855
chr1 19253093 19253105 TEAD1 JASPAR yes 118242491
chr1 19253094 19253102 TEAD3 JASPAR yes 27161856
chr1 19253094 19253102 TEAD3 JASPAR yes 118242492
chr1 19253118 19253128 MAX JASPAR yes 27161857
chr1 19253118 19253128 MAX JASPAR yes 118242493
chr1 19253119 19253129 MAX JASPAR yes 27161858
chr1 19253119 19253129 MLX JASPAR yes 27161859
chr1 19253119 19253129 TFE3 JASPAR yes 27161860
chr1 19253119 19253129 TFEB JASPAR yes 27161861
chr1 19253119 19253129 TFEC JASPAR yes 27161862
chr1 19253119 19253129 MAX JASPAR yes 118242494
chr1 19253119 19253129 MLX JASPAR yes 118242495
chr1 19253119 19253129 TFE3 JASPAR yes 118242496
chr1 19253119 19253129 TFEB JASPAR yes 118242497
chr1 19253119 19253129 TFEC JASPAR yes 118242498
chr1 19253120 19253127 USF1 JASPAR yes 27161863
chr1 19253120 19253127 USF1 JASPAR yes 118242499
chr1 19253121 19253126 MYC TRANSFAC yes 27161864
chr1 19253121 19253126 USF1 TRANSFAC yes 27161865
chr1 19253121 19253126 USF2 TRANSFAC yes 27161866
chr1 19253121 19253126 MYC TRANSFAC yes 118242500
chr1 19253121 19253126 USF1 TRANSFAC yes 118242501
chr1 19253121 19253126 USF2 TRANSFAC yes 118242502
chr1 19253149 19253160 EBF1 JASPAR yes 27161867
chr1 19253149 19253160 EBF1 JASPAR yes 118242503
chr1 19253153 19253158 TFAP2A TRANSFAC yes 27161868
chr1 19253153 19253158 TFAP2A TRANSFAC yes 118242504
chr1 19253153 19253159 MZF1 JASPAR yes 27161869
chr1 19253153 19253159 MZF1 JASPAR yes 118242505
chr1 19253164 19253169 SP1 TRANSFAC yes 27161870
chr1 19253164 19253169 SP1 TRANSFAC yes 118242506
chr1 19253167 19253171 LFA1 TRANSFAC yes 27161871
chr1 19253167 19253171 LFA1 TRANSFAC yes 118242507
chr1 19253181 19253201 RREB1 JASPAR yes 27161872
chr1 19253181 19253201 RREB1 JASPAR yes 118242508
chr1 19253185 19253191 MZF1 JASPAR yes 27161873
chr1 19253185 19253191 MZF1 JASPAR yes 118242509
chr1 19253186 19253196 SP1 JASPAR yes 27161874
chr1 19253186 19253196 SP1 JASPAR yes 118242510
chr1 19253186 19253206 RREB1 JASPAR yes 27161875
chr1 19253186 19253206 RREB1 JASPAR yes 118242511
chr1 19253187 19253207 RREB1 JASPAR yes 27161876
chr1 19253187 19253207 RREB1 JASPAR yes 118242512
chr1 19253188 19253198 ZNF740 JASPAR yes 27161877
chr1 19253188 19253198 ZNF740 JASPAR yes 118242513
chr1 19253217 19253238 ZNF263 JASPAR yes 27161878
chr1 19253217 19253238 ZNF263 JASPAR yes 118242514
chr1 19253218 19253228 SP1 JASPAR yes 27161879
chr1 19253218 19253228 SP1 JASPAR yes 118242515
chr1 19253219 19253229 SP1 JASPAR yes 27161880
chr1 19253219 19253229 SP1 JASPAR yes 118242516
chr1 19253231 19253248 ESR1 JASPAR yes 27161881
chr1 19253231 19253248 ESR1 JASPAR yes 118242517
chr1 19253239 19253257 ESR2 JASPAR yes 27161882
chr1 19253239 19253257 ESR2 JASPAR yes 118242518
chr1 19253255 19253266 FLI1 JASPAR yes 27161883
chr1 19253255 19253266 FLI1 JASPAR yes 118242519
chr1 19253289 19253294 SP1 TRANSFAC yes 27161884
chr1 19253289 19253294 SP1 TRANSFAC yes 118242520
chr1 19253292 19253298 ETS1 JASPAR yes 27161885
chr1 19253292 19253298 ETS1 JASPAR yes 118242521
chr1 19253293 19253303 RELA JASPAR yes 27161886
chr1 19253293 19253303 RELA JASPAR yes 118242522
chr1 19253302 19253316 BATF3 JASPAR yes 27161887
chr1 19253302 19253316 BATF3 JASPAR yes 118242523
chr1 19253320 19253334 JUN JASPAR yes 27161888
chr1 19253320 19253334 JUN JASPAR yes 118242524
chr1 19253322 19253333 BATF JASPAR yes 27161889
chr1 19253322 19253333 BATF JASPAR yes 118242525
chr1 19253323 19253334 FOSL2 JASPAR yes 27161890
chr1 19253323 19253334 JUNB JASPAR yes 27161891
chr1 19253323 19253334 NFE2L2 JASPAR yes 27161892
chr1 19253323 19253334 FOSL2 JASPAR yes 118242526
chr1 19253323 19253334 JUNB JASPAR yes 118242527
chr1 19253323 19253334 NFE2L2 JASPAR yes 118242528
chr1 19253324 19253335 FOS JASPAR yes 27161893
chr1 19253324 19253335 FOSL1 JASPAR yes 27161894
chr1 19253324 19253335 JUND JASPAR yes 27161895
chr1 19253324 19253335 FOS JASPAR yes 118242529
chr1 19253324 19253335 FOSL1 JASPAR yes 118242530
chr1 19253324 19253335 JUND JASPAR yes 118242531
chr1 19253325 19253336 FOSL2 JASPAR yes 27161896
chr1 19253325 19253336 JUNB JASPAR yes 27161897
chr1 19253325 19253336 FOSL2 JASPAR yes 118242532
chr1 19253325 19253336 JUNB JASPAR yes 118242533
chr1 19253325 19253339 JUN JASPAR yes 27161898
chr1 19253325 19253339 JUN JASPAR yes 118242534
chr1 19253337 19253349 IRF1 JASPAR yes 27161899
chr1 19253337 19253349 IRF1 JASPAR yes 118242535
chr1 19253341 19253352 ELK4 JASPAR yes 27161900
chr1 19253341 19253352 FLI1 JASPAR yes 27161901
chr1 19253341 19253352 ELK4 JASPAR yes 118242536
chr1 19253341 19253352 FLI1 JASPAR yes 118242537
chr1 19253342 19253352 ELK1 JASPAR yes 27161902
chr1 19253342 19253352 ELK3 JASPAR yes 27161903
chr1 19253342 19253352 ERF JASPAR yes 27161904
chr1 19253342 19253352 ERG JASPAR yes 27161905
chr1 19253342 19253352 ETS1 JASPAR yes 27161906
chr1 19253342 19253352 ETV1 JASPAR yes 27161907
chr1 19253342 19253352 ETV3 JASPAR yes 27161908
chr1 19253342 19253352 ETV4 JASPAR yes 27161909
chr1 19253342 19253352 ETV6 JASPAR yes 27161910
chr1 19253342 19253352 FEV JASPAR yes 27161911
chr1 19253342 19253352 FLI1 JASPAR yes 27161912
chr1 19253342 19253352 GABPA JASPAR yes 27161913
chr1 19253342 19253352 ELK1 JASPAR yes 118242538
chr1 19253342 19253352 ELK3 JASPAR yes 118242539
chr1 19253342 19253352 ERF JASPAR yes 118242540
chr1 19253342 19253352 ERG JASPAR yes 118242541
chr1 19253342 19253352 ETS1 JASPAR yes 118242542
chr1 19253342 19253352 ETV1 JASPAR yes 118242543
chr1 19253342 19253352 ETV3 JASPAR yes 118242544
chr1 19253342 19253352 ETV4 JASPAR yes 118242545
chr1 19253342 19253352 ETV6 JASPAR yes 118242546
chr1 19253342 19253352 FEV JASPAR yes 118242547
chr1 19253342 19253352 FLI1 JASPAR yes 118242548
chr1 19253342 19253352 GABPA JASPAR yes 118242549
chr1 19253342 19253353 ETV2 JASPAR yes 27161914
chr1 19253342 19253353 ETV2 JASPAR yes 118242550
chr1 19253342 19253354 ELF4 JASPAR yes 27161915
chr1 19253342 19253354 ELF4 JASPAR yes 118242551
chr1 19253342 19253355 ELF1 JASPAR yes 27161916
chr1 19253342 19253355 ELF1 JASPAR yes 118242552
chr1 19253343 19253350 SPI1 JASPAR yes 27161917
chr1 19253343 19253350 SPI1 JASPAR yes 118242553
chr1 19253343 19253351 EHF JASPAR yes 27161918
chr1 19253343 19253351 FEV JASPAR yes 27161919
chr1 19253343 19253351 EHF JASPAR yes 118242554
chr1 19253343 19253351 FEV JASPAR yes 118242555
chr1 19253374 19253385 E2F4 JASPAR yes 27161920
chr1 19253374 19253385 E2F6 JASPAR yes 27161921
chr1 19253374 19253385 E2F4 JASPAR yes 118242556
chr1 19253374 19253385 E2F6 JASPAR yes 118242557
chr1 19253375 19253386 E2F1 JASPAR yes 27161922
chr1 19253375 19253386 E2F1 JASPAR yes 118242558
chr1 19253386 19253392 PEA3 TRANSFAC yes 27161923
chr1 19253386 19253392 PEA3 TRANSFAC yes 118242559
SNP sites on vista593[chr1:19253034-19253391]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 19253094 rs186679893 C T
TEAD1 TEAD3 TEAD4
128085
chr1 19253109 rs146114018 C T no 128086
chr1 19253112 rs567400702 C A no 128087
chr1 19253118 rs571433653 G C
MAX
128088
chr1 19253200 rs79631815 C A
RREB1
128089
chr1 19253223 rs74961445 C A,G
SP1 ZNF263
128090
chr1 19253294 rs192350117 G A
ETS1 RELA SP1
128091
chr1 19253360 rs568630445 G A no 128092
chr1 19253368 rs568154886 G A no 128093
chr1 19253373 rs563152240 G A no 128094
chr1 19253382 rs75847057 G A
E2F1 E2F4 E2F6
128095
Genes possibly regulated by vista593[chr1:19253034-19253391]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 19166093 19186176 - TAS1R2 ENSG00000179002.5 19186176 0.94 1.0 252 33142
chr1 19175767 19247615 - RP13-279N23.2 ENSG00000255275.3 19247615 0.98 0.94 253 94581
chr1 19197926 19229275 - ALDH4A1 ENSG00000159423.12 19229275 0.95 0.98 254 76241
chr1 19230775 19283180 - IFFO2 ENSG00000169991.6 19283180 0.83 0.99 255 70211
Expression level of Genes
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miRNAs possibly regulated by vista593[chr1:19253034-19253391]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results