EnhancerDB
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  3. rs79631815[chr1:19253200]
Enhancers that have rs79631815[chr1:19253200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 19253034 19253391 vista593
VISTA
Transcript factors that have rs79631815[chr1:19253200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19250131 19253630 ZNF274 GTRD no Bone Marrow (K562) 107802285
chr1 19253181 19253201 RREB1 JASPAR yes 27161872
chr1 19253181 19253201 RREB1 JASPAR yes 118242508
chr1 19253186 19253206 RREB1 JASPAR yes 27161875
chr1 19253186 19253206 RREB1 JASPAR yes 118242511
chr1 19253187 19253207 RREB1 JASPAR yes 27161876
chr1 19253187 19253207 RREB1 JASPAR yes 118242512
Genes associated with rs79631815[chr1:19253200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More