EnhancerDB
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  3. vista595[chr1:19271920-19272097]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista595[chr1:19271920-19272097]
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Tissue distribution of vista595
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Transcription factor that possibly regulate vista595[chr1:19271920-19272097]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 19271948 19271958 MZF1 JASPAR yes 27164599
chr1 19271948 19271958 MZF1 JASPAR yes 118242591
chr1 19271951 19271957 SP1 TRANSFAC yes 27164600
chr1 19271951 19271957 SP1 TRANSFAC yes 118242592
chr1 19271951 19271961 SP1 JASPAR yes 27164601
chr1 19271951 19271961 SP1 JASPAR yes 118242593
chr1 19271963 19271974 FOXA1 JASPAR yes 27164602
chr1 19271963 19271974 FOXA1 JASPAR yes 118242594
chr1 19271973 19271978 SP1 TRANSFAC yes 27164603
chr1 19271973 19271978 SP1 TRANSFAC yes 118242595
chr1 19271976 19271990 TLX1 JASPAR yes 27164604
chr1 19271976 19271990 TLX1 JASPAR yes 118242596
chr1 19272003 19272006 MYB TRANSFAC yes 27164605
chr1 19272003 19272006 MYB TRANSFAC yes 118242597
chr1 19272009 19272020 CDX2 JASPAR yes 27164606
chr1 19272009 19272020 CDX2 JASPAR yes 118242598
chr1 19272010 19272021 HOXA10 JASPAR yes 27164607
chr1 19272010 19272021 HOXA10 JASPAR yes 118242599
chr1 19272011 19272020 CDX1 JASPAR yes 27164608
chr1 19272011 19272020 CDX1 JASPAR yes 118242600
chr1 19272018 19272024 GATA3 JASPAR yes 27164609
chr1 19272018 19272024 GATA3 JASPAR yes 118242601
chr1 19272023 19272033 EN2 JASPAR yes 27164610
chr1 19272023 19272033 ESX1 JASPAR yes 27164611
chr1 19272023 19272033 GBX1 JASPAR yes 27164612
chr1 19272023 19272033 GBX2 JASPAR yes 27164613
chr1 19272023 19272033 HESX1 JASPAR yes 27164614
chr1 19272023 19272033 LBX2 JASPAR yes 27164615
chr1 19272023 19272033 LHX2 JASPAR yes 27164616
chr1 19272023 19272033 MIXL1 JASPAR yes 27164617
chr1 19272023 19272033 MNX1 JASPAR yes 27164618
chr1 19272023 19272033 RAX JASPAR yes 27164619
chr1 19272023 19272033 EN2 JASPAR yes 118242602
chr1 19272023 19272033 ESX1 JASPAR yes 118242603
chr1 19272023 19272033 GBX1 JASPAR yes 118242604
chr1 19272023 19272033 GBX2 JASPAR yes 118242605
chr1 19272023 19272033 HESX1 JASPAR yes 118242606
chr1 19272023 19272033 LBX2 JASPAR yes 118242607
chr1 19272023 19272033 LHX2 JASPAR yes 118242608
chr1 19272023 19272033 MIXL1 JASPAR yes 118242609
chr1 19272023 19272033 MNX1 JASPAR yes 118242610
chr1 19272023 19272033 RAX JASPAR yes 118242611
chr1 19272024 19272028 H1TF2 TRANSFAC yes 27164620
chr1 19272024 19272028 NFE TRANSFAC yes 27164621
chr1 19272024 19272028 SRF TRANSFAC yes 27164622
chr1 19272024 19272028 H1TF2 TRANSFAC yes 118242612
chr1 19272024 19272028 NFE TRANSFAC yes 118242613
chr1 19272024 19272028 SRF TRANSFAC yes 118242614
chr1 19272024 19272032 BARX1 JASPAR yes 27164623
chr1 19272024 19272032 BSX JASPAR yes 27164624
chr1 19272024 19272032 DLX6 JASPAR yes 27164625
chr1 19272024 19272032 ISX JASPAR yes 27164626
chr1 19272024 19272032 LBX1 JASPAR yes 27164627
chr1 19272024 19272032 LHX9 JASPAR yes 27164628
chr1 19272024 19272032 MSX1 JASPAR yes 27164629
chr1 19272024 19272032 MSX2 JASPAR yes 27164630
chr1 19272024 19272032 NKX6-2 JASPAR yes 27164631
chr1 19272024 19272032 PRRX1 JASPAR yes 27164632
chr1 19272024 19272032 RAX2 JASPAR yes 27164633
chr1 19272024 19272032 SHOX JASPAR yes 27164634
chr1 19272024 19272032 UNCX JASPAR yes 27164635
chr1 19272024 19272032 BARX1 JASPAR yes 118242615
chr1 19272024 19272032 BSX JASPAR yes 118242616
chr1 19272024 19272032 DLX6 JASPAR yes 118242617
chr1 19272024 19272032 ISX JASPAR yes 118242618
chr1 19272024 19272032 LBX1 JASPAR yes 118242619
chr1 19272024 19272032 LHX9 JASPAR yes 118242620
chr1 19272024 19272032 MSX1 JASPAR yes 118242621
chr1 19272024 19272032 MSX2 JASPAR yes 118242622
chr1 19272024 19272032 NKX6-2 JASPAR yes 118242623
chr1 19272024 19272032 PRRX1 JASPAR yes 118242624
chr1 19272024 19272032 RAX2 JASPAR yes 118242625
chr1 19272024 19272032 SHOX JASPAR yes 118242626
chr1 19272024 19272032 UNCX JASPAR yes 118242627
chr1 19272031 19272046 NR2C2 JASPAR yes 27164636
chr1 19272031 19272046 NR2C2 JASPAR yes 118242628
chr1 19272033 19272039 SP1 TRANSFAC yes 27164637
chr1 19272033 19272039 SP1 TRANSFAC yes 118242629
chr1 19272034 19272039 SP1 TRANSFAC yes 27164638
chr1 19272034 19272039 SP1 TRANSFAC yes 118242630
chr1 19272037 19272043 ETS1 JASPAR yes 27164639
chr1 19272037 19272043 SPI1 JASPAR yes 27164640
chr1 19272037 19272043 ETS1 JASPAR yes 118242631
chr1 19272037 19272043 SPI1 JASPAR yes 118242632
chr1 19272042 19272063 REST JASPAR yes 27164641
chr1 19272042 19272063 REST JASPAR yes 118242633
chr1 19272043 19272062 REST JASPAR yes 27164642
chr1 19272043 19272062 REST JASPAR yes 118242634
chr1 19272046 19272050 NFE TRANSFAC yes 27164643
chr1 19272046 19272050 NFE TRANSFAC yes 118242635
chr1 19272060 19272065 SP1 TRANSFAC yes 27164644
chr1 19272060 19272065 SP1 TRANSFAC yes 118242636
chr1 19272063 19272084 REST JASPAR yes 27164645
chr1 19272063 19272084 REST JASPAR yes 118242637
chr1 19272090 19272108 ESR2 JASPAR yes 27164646
chr1 19272090 19272108 ESR2 JASPAR yes 118242638
SNP sites on vista595[chr1:19271920-19272097]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 19271924 rs16862392 A T no 128327
chr1 19272055 rs572854625 G A
REST
128328
Genes possibly regulated by vista595[chr1:19271920-19272097]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 19166093 19186176 - TAS1R2 ENSG00000179002.5 19186176 0.94 1.0 252 14256
chr1 19175767 19247615 - RP13-279N23.2 ENSG00000255275.3 19247615 0.98 0.94 253 75695
chr1 19197926 19229275 - ALDH4A1 ENSG00000159423.12 19229275 0.95 0.98 254 57355
chr1 19230775 19283180 - IFFO2 ENSG00000169991.6 19283180 0.83 0.99 255 88917
Expression level of Genes
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miRNAs possibly regulated by vista595[chr1:19271920-19272097]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results