EnhancerDB
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  3. vista618[chr1:19803336-19803680]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista618[chr1:19803336-19803680]
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Tissue distribution of vista618
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Transcription factor that possibly regulate vista618[chr1:19803336-19803680]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 19803338 19803349 NFKB1 JASPAR yes 27195900
chr1 19803338 19803349 NFKB1 JASPAR yes 118243552
chr1 19803357 19803370 JUN JASPAR yes 27195901
chr1 19803357 19803370 JUN JASPAR yes 118243553
chr1 19803368 19803372 TEAD2 TRANSFAC yes 27195902
chr1 19803368 19803372 TEAD2 TRANSFAC yes 118243554
chr1 19803368 19803373 TBP TRANSFAC yes 27195903
chr1 19803368 19803373 TBP TRANSFAC yes 118243555
chr1 19803368 19803374 TFIID TRANSFAC yes 27195904
chr1 19803368 19803374 TFIID TRANSFAC yes 118243556
chr1 19803370 19803381 FOXA1 JASPAR yes 27195905
chr1 19803370 19803381 FOXH1 JASPAR yes 27195906
chr1 19803370 19803381 FOXA1 JASPAR yes 118243557
chr1 19803370 19803381 FOXH1 JASPAR yes 118243558
chr1 19803370 19803385 FOXA1 JASPAR yes 27195907
chr1 19803370 19803385 FOXA1 JASPAR yes 118243559
chr1 19803371 19803382 FOXB1 JASPAR yes 27195908
chr1 19803371 19803382 FOXC1 JASPAR yes 27195909
chr1 19803371 19803382 FOXB1 JASPAR yes 118243560
chr1 19803371 19803382 FOXC1 JASPAR yes 118243561
chr1 19803371 19803383 FOXC2 JASPAR yes 27195910
chr1 19803371 19803383 FOXC2 JASPAR yes 118243562
chr1 19803372 19803384 FOXI1 JASPAR yes 27195911
chr1 19803372 19803384 FOXI1 JASPAR yes 118243563
chr1 19803374 19803382 FOXG1 JASPAR yes 27195912
chr1 19803374 19803382 FOXG1 JASPAR yes 118243564
chr1 19803381 19803387 MZF1 JASPAR yes 27195913
chr1 19803381 19803387 MZF1 JASPAR yes 118243565
chr1 19803386 19803400 TLX1 JASPAR yes 27195914
chr1 19803386 19803400 TLX1 JASPAR yes 118243566
chr1 19803392 19803405 SMAD2 JASPAR yes 27195915
chr1 19803392 19803405 SMAD2 JASPAR yes 118243567
chr1 19803393 19803414 ZNF263 JASPAR yes 27195916
chr1 19803393 19803414 ZNF263 JASPAR yes 118243568
chr1 19803412 19803425 NFKB1 JASPAR yes 27195917
chr1 19803412 19803425 NFKB1 JASPAR yes 118243569
chr1 19803413 19803423 NFKB1 JASPAR yes 27195918
chr1 19803413 19803423 RELA JASPAR yes 27195919
chr1 19803413 19803423 REL JASPAR yes 27195920
chr1 19803413 19803423 NFKB1 JASPAR yes 118243570
chr1 19803413 19803423 RELA JASPAR yes 118243571
chr1 19803413 19803423 REL JASPAR yes 118243572
chr1 19803413 19803424 NFKB1 JASPAR yes 27195921
chr1 19803413 19803424 NFKB1 JASPAR yes 118243573
chr1 19803414 19803424 RELA JASPAR yes 27195922
chr1 19803414 19803424 RELA JASPAR yes 118243574
chr1 19803416 19803427 DUX4 JASPAR yes 27195923
chr1 19803416 19803427 DUX4 JASPAR yes 118243575
chr1 19803417 19803430 ATF4 JASPAR yes 27195924
chr1 19803417 19803430 ATF4 JASPAR yes 118243576
chr1 19803443 19803458 HNF4A JASPAR yes 27195925
chr1 19803443 19803458 HNF4A JASPAR yes 118243577
chr1 19803452 19803468 RFX3 JASPAR yes 27195926
chr1 19803452 19803468 RFX4 JASPAR yes 27195927
chr1 19803452 19803468 RFX3 JASPAR yes 118243578
chr1 19803452 19803468 RFX4 JASPAR yes 118243579
chr1 19803453 19803472 RFX2 JASPAR yes 27195928
chr1 19803453 19803472 RFX2 JASPAR yes 118243580
chr1 19803455 19803470 RFX5 JASPAR yes 27195929
chr1 19803455 19803470 RFX5 JASPAR yes 118243581
chr1 19803460 19803472 PKNOX2 JASPAR yes 27195930
chr1 19803460 19803472 TGIF2 JASPAR yes 27195931
chr1 19803460 19803472 PKNOX2 JASPAR yes 118243582
chr1 19803460 19803472 TGIF2 JASPAR yes 118243583
chr1 19803470 19803474 YY1 TRANSFAC yes 27195932
chr1 19803470 19803474 YY1 TRANSFAC yes 118243584
chr1 19803472 19803480 LBX1 JASPAR yes 27195933
chr1 19803472 19803480 LBX1 JASPAR yes 118243585
chr1 19803473 19803476 MYB TRANSFAC yes 27195934
chr1 19803473 19803476 MYB TRANSFAC yes 118243586
chr1 19803483 19803488 SP1 TRANSFAC yes 27195935
chr1 19803483 19803488 SP1 TRANSFAC yes 118243587
chr1 19803493 19803511 TP73 JASPAR yes 27195936
chr1 19803493 19803511 TP73 JASPAR yes 118243588
chr1 19803519 19803534 STAT2 JASPAR yes 27195937
chr1 19803519 19803534 STAT2 JASPAR yes 118243589
chr1 19803520 19803534 STAT1 JASPAR yes 27195938
chr1 19803520 19803534 STAT1 JASPAR yes 118243590
chr1 19803522 19803536 GATA2 JASPAR yes 27195939
chr1 19803522 19803536 GATA2 JASPAR yes 118243591
chr1 19803523 19803539 SRF JASPAR yes 27195940
chr1 19803523 19803539 SRF JASPAR yes 118243592
chr1 19803524 19803529 ETS2 TRANSFAC yes 27195941
chr1 19803524 19803529 ETS2 TRANSFAC yes 118243593
chr1 19803526 19803534 GATA3 JASPAR yes 27195942
chr1 19803526 19803534 GATA5 JASPAR yes 27195943
chr1 19803526 19803534 GATA3 JASPAR yes 118243594
chr1 19803526 19803534 GATA5 JASPAR yes 118243595
chr1 19803536 19803549 JUN JASPAR yes 27195944
chr1 19803536 19803549 JUN JASPAR yes 118243596
chr1 19803536 19803550 SPIC JASPAR yes 27195945
chr1 19803536 19803550 SPIC JASPAR yes 118243597
chr1 19803591 19803600 HIC2 JASPAR yes 27195946
chr1 19803591 19803600 HIC2 JASPAR yes 118243598
chr1 19803594 19803598 LFA1 TRANSFAC yes 27195947
chr1 19803594 19803598 LFA1 TRANSFAC yes 118243599
chr1 19803595 19803605 ERG JASPAR yes 27195948
chr1 19803595 19803605 ETS1 JASPAR yes 27195949
chr1 19803595 19803605 ETV1 JASPAR yes 27195950
chr1 19803595 19803605 ETV3 JASPAR yes 27195951
chr1 19803595 19803605 ETV4 JASPAR yes 27195952
chr1 19803595 19803605 ETV5 JASPAR yes 27195953
chr1 19803595 19803605 FEV JASPAR yes 27195954
chr1 19803595 19803605 FLI1 JASPAR yes 27195955
chr1 19803595 19803605 ERG JASPAR yes 118243600
chr1 19803595 19803605 ETS1 JASPAR yes 118243601
chr1 19803595 19803605 ETV1 JASPAR yes 118243602
chr1 19803595 19803605 ETV3 JASPAR yes 118243603
chr1 19803595 19803605 ETV4 JASPAR yes 118243604
chr1 19803595 19803605 ETV5 JASPAR yes 118243605
chr1 19803595 19803605 FEV JASPAR yes 118243606
chr1 19803595 19803605 FLI1 JASPAR yes 118243607
chr1 19803595 19803606 SPDEF JASPAR yes 27195956
chr1 19803595 19803606 SPDEF JASPAR yes 118243608
chr1 19803596 19803605 ELK4 JASPAR yes 27195957
chr1 19803596 19803605 ELK4 JASPAR yes 118243609
chr1 19803608 19803617 THAP1 JASPAR yes 27195958
chr1 19803608 19803617 THAP1 JASPAR yes 118243610
chr1 19803616 19803627 FLI1 JASPAR yes 27195959
chr1 19803616 19803627 FLI1 JASPAR yes 118243611
chr1 19803617 19803622 ETS2 TRANSFAC yes 27195960
chr1 19803617 19803622 ETS2 TRANSFAC yes 118243612
chr1 19803617 19803625 EHF JASPAR yes 27195961
chr1 19803617 19803625 EHF JASPAR yes 118243613
chr1 19803623 19803628 SP1 TRANSFAC yes 27195962
chr1 19803623 19803628 SP1 TRANSFAC yes 118243614
chr1 19803671 19803676 GATA2 JASPAR yes 27195963
chr1 19803671 19803676 GATA2 JASPAR yes 118243615
chr1 19803678 19803682 YY1 TRANSFAC yes 27195964
chr1 19803678 19803682 YY1 TRANSFAC yes 118243616
SNP sites on vista618[chr1:19803336-19803680]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 19803412 rs74896313 G A
NFKB1 ZNF263
132338
chr1 19803460 rs12123568 A G
PKNOX2 RFX2 RFX3 RFX4 RFX5 TGIF2
132339
chr1 19803522 rs187125626 G A
GATA2 STAT1 STAT2
132340
chr1 19803585 rs7517488 C T no 132341
chr1 19803622 rs59252651 A T
EHF ETS2 FLI1
132342
Genes possibly regulated by vista618[chr1:19803336-19803680]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 19665267 19812066 - CAPZB ENSG00000077549.13 19812066 0.66 0.99 262 91614
Expression level of Genes
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miRNAs possibly regulated by vista618[chr1:19803336-19803680]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results