EnhancerDB
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  3. vista672[chr1:21663991-21664182]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista672[chr1:21663991-21664182]
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Tissue distribution of vista672
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Transcription factor that possibly regulate vista672[chr1:21663991-21664182]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 21664001 21664014 POU2F2 JASPAR yes 27298159
chr1 21664001 21664014 POU2F2 JASPAR yes 118246101
chr1 21664004 21664013 POU3F4 JASPAR yes 27298160
chr1 21664004 21664013 POU5F1B JASPAR yes 27298161
chr1 21664004 21664013 POU3F4 JASPAR yes 118246102
chr1 21664004 21664013 POU5F1B JASPAR yes 118246103
chr1 21664013 21664017 YY1 TRANSFAC yes 27298162
chr1 21664013 21664017 YY1 TRANSFAC yes 118246104
chr1 21664015 21664022 NKX3-1 JASPAR yes 27298163
chr1 21664015 21664022 NKX3-1 JASPAR yes 118246105
chr1 21664018 21664032 POU1F1 JASPAR yes 27298164
chr1 21664018 21664032 POU1F1 JASPAR yes 118246106
chr1 21664019 21664031 POU3F1 JASPAR yes 27298165
chr1 21664019 21664031 POU3F2 JASPAR yes 27298166
chr1 21664019 21664031 POU3F1 JASPAR yes 118246107
chr1 21664019 21664031 POU3F2 JASPAR yes 118246108
chr1 21664020 21664027 NKX3-1 JASPAR yes 27298167
chr1 21664020 21664027 NKX3-1 JASPAR yes 118246109
chr1 21664020 21664031 PHOX2A JASPAR yes 27298168
chr1 21664020 21664031 PROP1 JASPAR yes 27298169
chr1 21664020 21664031 PHOX2A JASPAR yes 118246110
chr1 21664020 21664031 PROP1 JASPAR yes 118246111
chr1 21664032 21664049 ZNF410 JASPAR yes 27298170
chr1 21664032 21664049 ZNF410 JASPAR yes 118246112
chr1 21664035 21664046 RUNX1 JASPAR yes 27298171
chr1 21664035 21664046 RUNX1 JASPAR yes 118246113
chr1 21664040 21664052 MEF2A JASPAR yes 27298172
chr1 21664040 21664052 MEF2B JASPAR yes 27298173
chr1 21664040 21664052 MEF2A JASPAR yes 118246114
chr1 21664040 21664052 MEF2B JASPAR yes 118246115
chr1 21664058 21664073 NR2C2 JASPAR yes 27298174
chr1 21664058 21664073 NR2C2 JASPAR yes 118246116
chr1 21664064 21664073 THAP1 JASPAR yes 27298175
chr1 21664064 21664073 THAP1 JASPAR yes 118246117
chr1 21664076 21664080 H4TF2 TRANSFAC yes 27298176
chr1 21664076 21664080 H4TF2 TRANSFAC yes 118246118
chr1 21664094 21664107 JUN JASPAR yes 27298177
chr1 21664094 21664107 JUN JASPAR yes 118246119
chr1 21664106 21664109 MYB TRANSFAC yes 27298178
chr1 21664106 21664109 MYB TRANSFAC yes 118246120
chr1 21664120 21664139 CTCF JASPAR yes 27298179
chr1 21664120 21664139 CTCF JASPAR yes 118246121
chr1 21664121 21664124 MYB TRANSFAC yes 27298180
chr1 21664121 21664124 MYB TRANSFAC yes 118246122
chr1 21664163 21664175 NHLH1 JASPAR yes 27298181
chr1 21664163 21664175 NHLH1 JASPAR yes 118246123
chr1 21664164 21664174 NHLH1 JASPAR yes 27298182
chr1 21664164 21664174 NHLH1 JASPAR yes 118246124
SNP sites on vista672[chr1:21663991-21664182]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 21664008 rs547919529 T C
POU2F2 POU3F4 POU5F1B
143431
chr1 21664055 rs146682684 C T no 143432
chr1 21664056 rs114459796 G A no 143433
chr1 21664135 rs530296109 C T
CTCF
143434
chr1 21664167 rs548425313 C G
NHLH1
143435
Genes possibly regulated by vista672[chr1:21663991-21664182]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 21543740 21671997 - ECE1 ENSG00000117298.10 21671997 0.68 1.0 288 92185
Expression level of Genes
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miRNAs possibly regulated by vista672[chr1:21663991-21664182]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results