EnhancerDB
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  3. rs530296109[chr1:21664135]
Enhancers that have rs530296109[chr1:21664135]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 21663991 21664182 vista672
VISTA
Transcript factors that have rs530296109[chr1:21664135]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21662920 21664371 TCF7L2 GTRD no Colon (HCT116) 107802355
chr1 21663393 21664697 ZNF274 GTRD no Bone Marrow (K562) 107802356
chr1 21663443 21665749 ZNF274 GTRD no Bone Marrow (K562) 107802357
chr1 21664120 21664139 CTCF JASPAR yes 27298179
chr1 21664120 21664139 CTCF JASPAR yes 118246121
Genes associated with rs530296109[chr1:21664135], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More