EnhancerDB
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  3. vista6928[chr10:29543500-29543829]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista6928[chr10:29543500-29543829]
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Tissue distribution of vista6928
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Transcription factor that possibly regulate vista6928[chr10:29543500-29543829]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr10 29542926 29543626 ZNF263 UCSC Txn Factor no Conserved 107905812
chr10 29543385 29543959 GATA2 UCSC Txn Factor no Conserved 107905814
chr10 29543463 29543779 EP300 UCSC Txn Factor no Conserved 107905821
chr10 29543569 29543744 GATA3 UCSC Txn Factor no Conserved 107905831
chr10 29543500 29543510 GABPA JASPAR yes 21066618
chr10 29543500 29543510 GABPA JASPAR yes 126304187
chr10 29543502 29543508 ETS1 JASPAR yes 21066619
chr10 29543502 29543508 SPI1 JASPAR yes 21066620
chr10 29543502 29543508 ETS1 JASPAR yes 126304188
chr10 29543502 29543508 SPI1 JASPAR yes 126304189
chr10 29543506 29543519 NFKB2 JASPAR yes 21066621
chr10 29543506 29543519 NFKB2 JASPAR yes 126304190
chr10 29543507 29543517 NFKB1 JASPAR yes 21066622
chr10 29543507 29543517 REL JASPAR yes 21066623
chr10 29543507 29543517 NFKB1 JASPAR yes 126304191
chr10 29543507 29543517 REL JASPAR yes 126304192
chr10 29543507 29543518 NFKB1 JASPAR yes 21066624
chr10 29543507 29543518 NFKB1 JASPAR yes 126304193
chr10 29543507 29543527 TP53 JASPAR yes 21066625
chr10 29543507 29543527 TP53 JASPAR yes 126304194
chr10 29543508 29543518 NFKB1 JASPAR yes 21066626
chr10 29543508 29543518 REL JASPAR yes 21066627
chr10 29543508 29543518 NFKB1 JASPAR yes 126304195
chr10 29543508 29543518 REL JASPAR yes 126304196
chr10 29543508 29543519 NFKB1 JASPAR yes 21066628
chr10 29543508 29543519 NFKB1 JASPAR yes 126304197
chr10 29543511 29543531 TP53 JASPAR yes 21066629
chr10 29543511 29543531 TP53 JASPAR yes 126304198
chr10 29543514 29543520 MZF1 JASPAR yes 21066630
chr10 29543514 29543520 MZF1 JASPAR yes 126304199
chr10 29543522 29543526 YY1 TRANSFAC yes 21066631
chr10 29543522 29543526 YY1 TRANSFAC yes 126304200
chr10 29543524 29543534 HOXA13 JASPAR yes 21066632
chr10 29543524 29543534 HOXB13 JASPAR yes 21066633
chr10 29543524 29543534 HOXD13 JASPAR yes 21066634
chr10 29543524 29543534 HOXA13 JASPAR yes 126304201
chr10 29543524 29543534 HOXB13 JASPAR yes 126304202
chr10 29543524 29543534 HOXD13 JASPAR yes 126304203
chr10 29543525 29543534 CDX1 JASPAR yes 21066635
chr10 29543525 29543534 CDX1 JASPAR yes 126304204
chr10 29543530 29543535 TFAP2A TRANSFAC yes 21066636
chr10 29543530 29543535 TFAP2A TRANSFAC yes 126304205
chr10 29543530 29543536 MZF1 JASPAR yes 21066637
chr10 29543530 29543536 MZF1 JASPAR yes 126304206
chr10 29543541 29543546 GATA2 JASPAR yes 21066638
chr10 29543541 29543546 GATA2 JASPAR yes 126304207
chr10 29543545 29543553 GATA3 JASPAR yes 21066639
chr10 29543545 29543553 GATA3 JASPAR yes 126304208
chr10 29543551 29543570 REST JASPAR yes 21066640
chr10 29543551 29543570 REST JASPAR yes 126304209
chr10 29543563 29543584 ZNF263 JASPAR yes 21066641
chr10 29543563 29543584 ZNF263 JASPAR yes 126304210
chr10 29543564 29543570 MZF1 JASPAR yes 21066642
chr10 29543564 29543570 MZF1 JASPAR yes 126304211
chr10 29543564 29543585 ZNF263 JASPAR yes 21066643
chr10 29543564 29543585 ZNF263 JASPAR yes 126304212
chr10 29543565 29543575 SP1 JASPAR yes 21066644
chr10 29543565 29543575 SP1 JASPAR yes 126304213
chr10 29543567 29543577 ZNF740 JASPAR yes 21066645
chr10 29543567 29543577 ZNF740 JASPAR yes 126304214
chr10 29543569 29543589 RREB1 JASPAR yes 21066646
chr10 29543569 29543589 RREB1 JASPAR yes 126304215
chr10 29543570 29543590 RREB1 JASPAR yes 21066647
chr10 29543570 29543590 RREB1 JASPAR yes 126304216
chr10 29543579 29543585 MZF1 JASPAR yes 21066648
chr10 29543579 29543585 MZF1 JASPAR yes 126304217
chr10 29543584 29543600 SOX4 JASPAR yes 21066649
chr10 29543584 29543600 SOX4 JASPAR yes 126304218
chr10 29543611 29543617 GATA3 JASPAR yes 21066650
chr10 29543611 29543617 GATA3 JASPAR yes 126304219
chr10 29543627 29543637 POU6F2 JASPAR yes 21066651
chr10 29543627 29543637 POU6F2 JASPAR yes 126304220
chr10 29543628 29543638 EMX1 JASPAR yes 21066652
chr10 29543628 29543638 EMX1 JASPAR yes 126304221
chr10 29543628 29543639 HOXC13 JASPAR yes 21066653
chr10 29543628 29543639 HOXC13 JASPAR yes 126304222
chr10 29543629 29543637 NKX6-1 JASPAR yes 21066654
chr10 29543629 29543637 NKX6-2 JASPAR yes 21066655
chr10 29543629 29543637 NKX6-1 JASPAR yes 126304223
chr10 29543629 29543637 NKX6-2 JASPAR yes 126304224
chr10 29543631 29543635 YY1 TRANSFAC yes 21066656
chr10 29543631 29543635 YY1 TRANSFAC yes 126304225
chr10 29543632 29543649 PAX1 JASPAR yes 21066657
chr10 29543632 29543649 PAX1 JASPAR yes 126304226
chr10 29543661 29543673 TEAD1 JASPAR yes 21066658
chr10 29543661 29543673 TEAD1 JASPAR yes 126304227
chr10 29543665 29543676 NRL JASPAR yes 21066659
chr10 29543665 29543676 NRL JASPAR yes 126304228
chr10 29543682 29543697 TFAP2C JASPAR yes 21066660
chr10 29543682 29543697 TFAP2C JASPAR yes 126304229
chr10 29543683 29543697 GLIS3 JASPAR yes 21066661
chr10 29543683 29543697 GLIS3 JASPAR yes 126304230
chr10 29543684 29543698 EBF1 JASPAR yes 21066662
chr10 29543684 29543698 EBF1 JASPAR yes 126304231
chr10 29543684 29543699 TFAP2A JASPAR yes 21066663
chr10 29543684 29543699 TFAP2A JASPAR yes 126304232
chr10 29543685 29543696 EBF1 JASPAR yes 21066664
chr10 29543685 29543696 EBF1 JASPAR yes 126304233
chr10 29543697 29543712 RUNX2 JASPAR yes 21066665
chr10 29543697 29543712 RUNX2 JASPAR yes 126304234
chr10 29543698 29543708 RUNX3 JASPAR yes 21066666
chr10 29543698 29543708 RUNX3 JASPAR yes 126304235
chr10 29543705 29543726 ZNF263 JASPAR yes 21066667
chr10 29543705 29543726 ZNF263 JASPAR yes 126304236
chr10 29543706 29543727 ZNF263 JASPAR yes 21066668
chr10 29543706 29543727 ZNF263 JASPAR yes 126304237
chr10 29543720 29543725 SP1 TRANSFAC yes 21066669
chr10 29543720 29543725 SP1 TRANSFAC yes 126304238
chr10 29543721 29543731 ZNF740 JASPAR yes 21066670
chr10 29543721 29543731 ZNF740 JASPAR yes 126304239
chr10 29543723 29543735 CREB1 JASPAR yes 21066671
chr10 29543723 29543735 CREB1 JASPAR yes 126304240
chr10 29543728 29543733 ATF1 TRANSFAC yes 21066672
chr10 29543728 29543733 ATF1 TRANSFAC yes 126304241
chr10 29543777 29543781 YY1 TRANSFAC yes 21066673
chr10 29543777 29543781 YY1 TRANSFAC yes 126304242
chr10 29543777 29543795 MAFF JASPAR yes 21066674
chr10 29543777 29543795 MAFF JASPAR yes 126304243
chr10 29543778 29543793 MAFK JASPAR yes 21066675
chr10 29543778 29543793 MAFK JASPAR yes 126304244
chr10 29543806 29543820 PAX6 JASPAR yes 21066676
chr10 29543806 29543820 PAX6 JASPAR yes 126304245
SNP sites on vista6928[chr10:29543500-29543829]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr10 29543629 rs151291907 G A
EMX1 EP300 GATA2 GATA3 HOXC13 NKX6-1 NKX6-2 POU6F2
1294139
chr10 29543643 rs576386908 C T
EP300 GATA2 GATA3 PAX1
1294140
chr10 29543687 rs56140062 C A,T
EBF1 EP300 GATA2 GATA3 GLIS3 TFAP2A TFAP2C
1294141
chr10 29543698 rs115146915 C T
EBF1 EP300 GATA2 GATA3 RUNX2 RUNX3 TFAP2A
1294142
Genes possibly regulated by vista6928[chr10:29543500-29543829]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr10 29577990 29607257 + LYZL1 ENSG00000120563.4 29577990 0.97 0.94 9709 65839
Expression level of Genes
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miRNAs possibly regulated by vista6928[chr10:29543500-29543829]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results