EnhancerDB
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  3. rs56140062[chr10:29543687]
Enhancers that have rs56140062[chr10:29543687]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 29540165 29549115 enh13090
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Ovary Lung (PC-9) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Uterus Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
chr10 29543500 29543829 vista6928
VISTA
Transcript factors that have rs56140062[chr10:29543687]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 29543315 29544340 ZNF274 GTRD no Blood (GM12878) 107905813
chr10 29543385 29543959 GATA2 UCSC Txn Factor no Conserved 107905814
chr10 29543409 29543959 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21424326
chr10 29543409 29543959 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107905816
chr10 29543417 29543781 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21424327
chr10 29543417 29543781 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107905817
chr10 29543435 29543951 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21424328
chr10 29543435 29543951 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107905818
chr10 29543439 29543895 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21424329
chr10 29543439 29543895 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107905819
chr10 29543449 29543785 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21424330
chr10 29543449 29543785 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107905820
chr10 29543463 29543779 EP300 UCSC Txn Factor no Conserved 107905821
chr10 29543465 29543741 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21424331
chr10 29543465 29543741 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107905822
chr10 29543465 29543921 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21424332
chr10 29543465 29543921 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107905823
chr10 29543483 29543853 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21424333
chr10 29543483 29543853 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107905824
chr10 29543491 29543771 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21424334
chr10 29543491 29543771 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107905825
chr10 29543502 29543758 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21424335
chr10 29543502 29543758 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107905826
chr10 29543543 29543763 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107905827
chr10 29543544 29543848 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21424336
chr10 29543544 29543848 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107905828
chr10 29543548 29543812 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107905829
chr10 29543555 29543711 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21424337
chr10 29543555 29543711 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107905830
chr10 29543569 29543744 GATA3 UCSC Txn Factor no Conserved 107905831
chr10 29543626 29544219 ZNF274 GTRD no Bone Marrow (K562) 21424338
chr10 29543626 29544219 ZNF274 GTRD no Bone Marrow (K562) 107905832
chr10 29543666 29544178 ZNF274 GTRD no Bone Marrow (K562) 21424339
chr10 29543666 29544178 ZNF274 GTRD no Bone Marrow (K562) 107905833
chr10 29543682 29543697 TFAP2C JASPAR yes 21066660
chr10 29543682 29543697 TFAP2C JASPAR yes 126304229
chr10 29543683 29543697 GLIS3 JASPAR yes 21066661
chr10 29543683 29543697 GLIS3 JASPAR yes 126304230
chr10 29543684 29543698 EBF1 JASPAR yes 21066662
chr10 29543684 29543698 EBF1 JASPAR yes 126304231
chr10 29543684 29543699 TFAP2A JASPAR yes 21066663
chr10 29543684 29543699 TFAP2A JASPAR yes 126304232
chr10 29543685 29543696 EBF1 JASPAR yes 21066664
chr10 29543685 29543696 EBF1 JASPAR yes 126304233
Genes associated with rs56140062[chr10:29543687], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More