EnhancerDB
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  3. vista792[chr1:25051079-25051208]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista792[chr1:25051079-25051208]
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Tissue distribution of vista792
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Transcription factor that possibly regulate vista792[chr1:25051079-25051208]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 25051105 25051109 YY1 TRANSFAC yes 27523398
chr1 25051105 25051109 YY1 TRANSFAC yes 118251651
chr1 25051124 25051140 NFYA JASPAR yes 27523399
chr1 25051124 25051140 NFYA JASPAR yes 118251652
chr1 25051126 25051146 RREB1 JASPAR yes 27523400
chr1 25051126 25051146 RREB1 JASPAR yes 118251653
chr1 25051127 25051142 NFYB JASPAR yes 27523401
chr1 25051127 25051142 NFYB JASPAR yes 118251654
chr1 25051129 25051134 NFY TRANSFAC yes 27523402
chr1 25051129 25051134 NFY TRANSFAC yes 118251655
chr1 25051130 25051140 SREBF1 JASPAR yes 27523403
chr1 25051130 25051140 SREBF1 JASPAR yes 118251656
chr1 25051138 25051149 NFE2L2 JASPAR yes 27523404
chr1 25051138 25051149 NFE2L2 JASPAR yes 118251657
chr1 25051140 25051158 ESR2 JASPAR yes 27523405
chr1 25051140 25051158 ESR2 JASPAR yes 118251658
chr1 25051141 25051147 ESR1 TRANSFAC yes 27523406
chr1 25051141 25051147 ESR1 TRANSFAC yes 118251659
chr1 25051143 25051147 ESR1 TRANSFAC yes 27523407
chr1 25051143 25051147 ESR1 TRANSFAC yes 118251660
chr1 25051143 25051154 USF1 JASPAR yes 27523408
chr1 25051143 25051154 USF1 JASPAR yes 118251661
chr1 25051144 25051154 TFE3 JASPAR yes 27523409
chr1 25051144 25051154 TFEB JASPAR yes 27523410
chr1 25051144 25051154 TFEC JASPAR yes 27523411
chr1 25051144 25051154 TFE3 JASPAR yes 118251662
chr1 25051144 25051154 TFEB JASPAR yes 118251663
chr1 25051144 25051154 TFEC JASPAR yes 118251664
chr1 25051144 25051155 USF1 JASPAR yes 27523412
chr1 25051144 25051155 USF2 JASPAR yes 27523413
chr1 25051144 25051155 USF1 JASPAR yes 118251665
chr1 25051144 25051155 USF2 JASPAR yes 118251666
chr1 25051145 25051155 MAX JASPAR yes 27523414
chr1 25051145 25051155 MAX JASPAR yes 118251667
chr1 25051151 25051155 ESR1 TRANSFAC yes 27523415
chr1 25051151 25051155 ESR1 TRANSFAC yes 118251668
chr1 25051153 25051170 RXRA JASPAR yes 27523416
chr1 25051153 25051170 RXRA JASPAR yes 118251669
chr1 25051164 25051179 RUNX2 JASPAR yes 27523417
chr1 25051164 25051179 RUNX2 JASPAR yes 118251670
chr1 25051188 25051206 NFYA JASPAR yes 27523418
chr1 25051188 25051206 NFYA JASPAR yes 118251671
chr1 25051191 25051207 NFYA JASPAR yes 27523419
chr1 25051191 25051207 NFYA JASPAR yes 118251672
chr1 25051193 25051203 EN2 JASPAR yes 27523420
chr1 25051193 25051203 EN2 JASPAR yes 118251673
chr1 25051194 25051207 DUXA JASPAR yes 27523421
chr1 25051194 25051207 DUXA JASPAR yes 118251674
chr1 25051194 25051209 NFYB JASPAR yes 27523422
chr1 25051194 25051209 NFYB JASPAR yes 118251675
chr1 25051195 25051206 DUX4 JASPAR yes 27523423
chr1 25051195 25051206 DUX4 JASPAR yes 118251676
chr1 25051196 25051201 NFY TRANSFAC yes 27523424
chr1 25051196 25051201 NFY TRANSFAC yes 118251677
chr1 25051204 25051214 TEAD1 JASPAR yes 27523425
chr1 25051204 25051214 TEAD4 JASPAR yes 27523426
chr1 25051204 25051214 TEAD1 JASPAR yes 118251678
chr1 25051204 25051214 TEAD4 JASPAR yes 118251679
chr1 25051204 25051216 TEAD1 JASPAR yes 27523427
chr1 25051204 25051216 TEAD1 JASPAR yes 118251680
chr1 25051205 25051213 TEAD3 JASPAR yes 27523428
chr1 25051205 25051213 TEAD3 JASPAR yes 118251681
SNP sites on vista792[chr1:25051079-25051208]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 25051094 rs539825813 C T no 167545
chr1 25051102 rs1002707 C A,T no 167546
chr1 25051106 rs3122047 C T
YY1
167547
chr1 25051153 rs1002706 G A
ESR1 ESR2 MAX RXRA TFE3 TFEB TFEC USF1 USF2
167548
Genes possibly regulated by vista792[chr1:25051079-25051208]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 24958207 24999758 + SRRM1 ENSG00000133226.12 24958207 0.73 0.99 336 7128
chr1 25071848 25170815 + CLIC4 ENSG00000169504.10 25071848 0.7 0.99 337 79360
Expression level of Genes
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miRNAs possibly regulated by vista792[chr1:25051079-25051208]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results